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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL2297 [new locus tag: SACOL_RS12085 ]
- pan locus tag?: SAUPAN005778000
- symbol: SACOL2297
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL2297 [new locus tag: SACOL_RS12085 ]
- symbol: SACOL2297
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2357959..2359083
- length: 1125
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3237369 NCBI
- RefSeq: YP_187104 NCBI
- BioCyc: see SACOL_RS12085
- MicrobesOnline: 913779 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1081ATGAAGATAGCAATTATAGGTGCAGGCATCGGTGGATTAACAGCTGCTGCATTATTACAA
GAACAAGGTCATACTATTAAAGTCTTTGAAAAAAATGAGTCAGTTAAAGAAATTGGCGCT
GGGATTGGTATCGGAGATAATGTGCTTAAAAAACTAGGTAATCATGACTTAGCTAAAGGT
ATTAAAAATGCTGGGCAAATCTTATCTACAATGACAGTGTTAGATGACAAAGATCGCCTG
TTAACTACTGTTAAATTAAAAAGTAATACATTGAATGTGACGTTACCACGCCAAACATTA
ATTGACATTATTAAATCTTATGTAAAAGATGACGCAATATTTACAAATCATGAAGTCACG
CATATAGATAATGAGACAGATAAAGTTACCATACATTTCGCGGAACAAGAAAGTGAAGCA
TTTGATTTATGTATTGGTGCTGATGGAATTCATTCTAAAGTGAGACAATCTGTAAATGCT
GACAGTAAAGTATTATATCAAGGGTATACATGCTTTAGAGGTTTAATTGATGATATTGAT
TTAAAGCATCCAGATTGTGCAAAAGAATACTGGGGAAGAAAAGGAAGAGTAGGTATTGTT
CCGTTATTAAATAATCAAGCATATTGGTTCATTACAATTAACTCGAAGGAAAACAATCAT
AAATATAGTTCGTTTGGTAAACCTCATTTGCAAGCATACTTTAATCACTATCCAAATGAA
GTTAGAGAGATCTTAGACAAACAAAGTGAAACAGGTATCTTATTGCATAATATTTATGAT
TTGAAACCACTCAAATCTTTTGTTTATGGTCGTACTATTTTACTAGGAGATGCAGCACAT
GCGACAACGCCTAATATGGGGCAAGGTGCTGGACAAGCAATGGAAGATGCTATCGTATTA
GTAAATTGTTTTAACGCATACGACTTTGAAAAAGCATTACAGCGTTATGATAAAATACGT
GTCAAACATACTGCAAAAGTAATTAAGCGTTCTAGAAAAATCGGTAAAATTGCCCAATAT
CGTAGTCGTTTATTTGTTGCAGTTAGAAATCGTATTATGAAAATGATGCCAAATGCATTA
GCAGCTGGACAAACTAAATTCTTATATAAATCGAAAGAAAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL2297 [new locus tag: SACOL_RS12085 ]
- symbol: SACOL2297
- description: hypothetical protein
- length: 374
- theoretical pI: 9.81248
- theoretical MW: 41890
- GRAVY: -0.317914
⊟Function[edit | edit source]
- ⊞TIGRFAM: salicylate 1-monooxygenase (TIGR03219; EC 1.14.13.1; HMM-score: 117.7)and 26 more
- ⊞TheSEED :
- Salicylate hydroxylase (EC 1.14.13.1)
Metabolism of Aromatic Compounds Metabolism of Aromatic Compounds - no subcategory Gentisate degradation Salicylate hydroxylase (EC 1.14.13.1)and 2 more - ⊞PFAM: NADP_Rossmann (CL0063) FAD_binding_3; FAD binding domain (PF01494; HMM-score: 81.4)and 22 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKIAIIGAGIGGLTAAALLQEQGHTIKVFEKNESVKEIGAGIGIGDNVLKKLGNHDLAKGIKNAGQILSTMTVLDDKDRLLTTVKLKSNTLNVTLPRQTLIDIIKSYVKDDAIFTNHEVTHIDNETDKVTIHFAEQESEAFDLCIGADGIHSKVRQSVNADSKVLYQGYTCFRGLIDDIDLKHPDCAKEYWGRKGRVGIVPLLNNQAYWFITINSKENNHKYSSFGKPHLQAYFNHYPNEVREILDKQSETGILLHNIYDLKPLKSFVYGRTILLGDAAHATTPNMGQGAGQAMEDAIVLVNCFNAYDFEKALQRYDKIRVKHTAKVIKRSRKIGKIAQYRSRLFVAVRNRIMKMMPNALAAGQTKFLYKSKEK
⊟Experimental data[edit | edit source]
- experimentally validated: PeptideAtlas
- protein localization: Cytoplasmic [1] [2]
- quantitative data / protein copy number per cell: 67 [3]
- ⊟interaction partners:
SACOL1385 (acnA) aconitate hydratase [4] (data from MRSA252) SACOL0452 (ahpC) alkyl hydroperoxide reductase subunit C [4] (data from MRSA252) SACOL2657 (arcA) arginine deiminase [4] (data from MRSA252) SACOL1494 (asnC) asparaginyl-tRNA synthetase [4] (data from MRSA252) SACOL0833 (clpP) ATP-dependent Clp protease proteolytic subunit [4] (data from MRSA252) SACOL0557 (cysK) cysteine synthase [4] (data from MRSA252) SACOL2130 (deoD) purine nucleoside phosphorylase [4] (data from MRSA252) SACOL1637 (dnaK) molecular chaperone DnaK [4] (data from MRSA252) SACOL0002 (dnaN) DNA polymerase III subunit beta [4] (data from MRSA252) SACOL0842 (eno) phosphopyruvate hydratase [4] (data from MRSA252) SACOL0634 (eutD) phosphotransacetylase [4] (data from MRSA252) SACOL1016 (fabI) enoyl-ACP reductase [4] (data from MRSA252) SACOL2117 (fbaA) fructose-bisphosphate aldolase [4] (data from MRSA252) SACOL2622 (fdaB) fructose-1,6-bisphosphate aldolase [4] (data from MRSA252) SACOL1329 (femC) glutamine synthetase [4] (data from MRSA252) SACOL2253 (femX) femX protein [4] (data from MRSA252) SACOL1782 (fhs) formate--tetrahydrofolate ligase [4] (data from MRSA252) SACOL1199 (ftsZ) cell division protein FtsZ [4] (data from MRSA252) SACOL0593 (fusA) elongation factor G [4] (data from MRSA252) SACOL0838 (gapA1) glyceraldehyde 3-phosphate dehydrogenase [4] (data from MRSA252) SACOL1734 (gapA2) glyceraldehyde 3-phosphate dehydrogenase 2 [4] (data from MRSA252) SACOL1961 (gatA) aspartyl/glutamyl-tRNA amidotransferase subunit A [4] (data from MRSA252) SACOL1960 (gatB) aspartyl/glutamyl-tRNA amidotransferase subunit B [4] (data from MRSA252) SACOL2145 (glmS) glucosamine--fructose-6-phosphate aminotransferase [4] (data from MRSA252) SACOL0961 (gluD) glutamate dehydrogenase [4] (data from MRSA252) SACOL1622 (glyS) glycyl-tRNA synthetase [4] (data from MRSA252) SACOL2415 (gpmA) phosphoglyceromutase [4] (data from MRSA252) SACOL2016 (groEL) chaperonin GroEL [4] (data from MRSA252) SACOL0460 (guaB) inosine-5'-monophosphate dehydrogenase [4] (data from MRSA252) SACOL1513 (hup) DNA-binding protein HU [4] (data from MRSA252) SACOL1741 (icd) isocitrate dehydrogenase [4] (data from MRSA252) SACOL1288 (infB) translation initiation factor IF-2 [4] (data from MRSA252) SACOL1727 (infC) translation initiation factor IF-3 [4] (data from MRSA252) SACOL0222 (ldh1) L-lactate dehydrogenase [4] (data from MRSA252) SACOL2618 (ldh2) L-lactate dehydrogenase [4] (data from MRSA252) SACOL0562 (lysS) lysyl-tRNA synthetase [4] (data from MRSA252) SACOL2623 (mqo2) malate:quinone oxidoreductase [4] (data from MRSA252) SACOL2116 (murAB) UDP-N-acetylglucosamine 1-carboxyvinyltransferase [4] (data from MRSA252) SACOL1102 (pdhA) pyruvate dehydrogenase complex E1 component subunit alpha [4] (data from MRSA252) SACOL1103 (pdhB) pyruvate dehydrogenase complex E1 component subunit beta [4] (data from MRSA252) SACOL1104 (pdhC) branched-chain alpha-keto acid dehydrogenase E2 [4] (data from MRSA252) SACOL1105 (pdhD) dihydrolipoamide dehydrogenase [4] (data from MRSA252) SACOL2128 (pdp) pyrimidine-nucleoside phosphorylase [4] (data from MRSA252) SACOL1746 (pfkA) 6-phosphofructokinase [4] (data from MRSA252) SACOL0204 (pflB) formate acetyltransferase [4] (data from MRSA252) SACOL0966 (pgi) glucose-6-phosphate isomerase [4] (data from MRSA252) SACOL0839 (pgk) phosphoglycerate kinase [4] (data from MRSA252) SACOL1293 (pnp) polynucleotide phosphorylase/polyadenylase [4] (data from MRSA252) SACOL1745 (pyk) pyruvate kinase [4] (data from MRSA252) SACOL1536 (rluB) ribosomal large subunit pseudouridine synthase B [4] (data from MRSA252) SACOL0584 (rplA) 50S ribosomal protein L1 [4] (data from MRSA252) SACOL2236 (rplB) 50S ribosomal protein L2 [4] (data from MRSA252) SACOL2239 (rplC) 50S ribosomal protein L3 [4] (data from MRSA252) SACOL2238 (rplD) 50S ribosomal protein L4 [4] (data from MRSA252) SACOL2227 (rplE) 50S ribosomal protein L5 [4] (data from MRSA252) SACOL2224 (rplF) 50S ribosomal protein L6 [4] (data from MRSA252) SACOL0585 (rplJ) 50S ribosomal protein L10 [4] (data from MRSA252) SACOL0583 (rplK) 50S ribosomal protein L11 [4] (data from MRSA252) SACOL0586 (rplL) 50S ribosomal protein L7/L12 [4] (data from MRSA252) SACOL2207 (rplM) 50S ribosomal protein L13 [4] (data from MRSA252) SACOL2220 (rplO) 50S ribosomal protein L15 [4] (data from MRSA252) SACOL2212 (rplQ) 50S ribosomal protein L17 [4] (data from MRSA252) SACOL2223 (rplR) 50S ribosomal protein L18 [4] (data from MRSA252) SACOL1257 (rplS) 50S ribosomal protein L19 [4] (data from MRSA252) SACOL1725 (rplT) 50S ribosomal protein L20 [4] (data from MRSA252) SACOL1702 (rplU) 50S ribosomal protein L21 [4] (data from MRSA252) SACOL2234 (rplV) 50S ribosomal protein L22 [4] (data from MRSA252) SACOL2237 (rplW) 50S ribosomal protein L23 [4] (data from MRSA252) SACOL2228 (rplX) 50S ribosomal protein L24 [4] (data from MRSA252) SACOL0545 (rplY) 50S ribosomal protein L25/general stress protein Ctc [4] (data from MRSA252) SACOL1700 (rpmA) 50S ribosomal protein L27 [4] (data from MRSA252) SACOL2231 (rpmC) 50S ribosomal protein L29 [4] (data from MRSA252) SACOL2112 (rpmE2) 50S ribosomal protein L31 [4] (data from MRSA252) SACOL2213 (rpoA) DNA-directed RNA polymerase subunit alpha [4] (data from MRSA252) SACOL0589 (rpoC) DNA-directed RNA polymerase subunit beta' [4] (data from MRSA252) SACOL1516 (rpsA) 30S ribosomal protein S1 [4] (data from MRSA252) SACOL1274 (rpsB) 30S ribosomal protein S2 [4] (data from MRSA252) SACOL2233 (rpsC) 30S ribosomal protein S3 [4] (data from MRSA252) SACOL1769 (rpsD) 30S ribosomal protein S4 [4] (data from MRSA252) SACOL2222 (rpsE) 30S ribosomal protein S5 [4] (data from MRSA252) SACOL0437 (rpsF) 30S ribosomal protein S6 [4] (data from MRSA252) SACOL0592 (rpsG) 30S ribosomal protein S7 [4] (data from MRSA252) SACOL2225 (rpsH) 30S ribosomal protein S8 [4] (data from MRSA252) SACOL2206 (rpsI) 30S ribosomal protein S9 [4] (data from MRSA252) SACOL2240 (rpsJ) 30S ribosomal protein S10 [4] (data from MRSA252) SACOL2214 (rpsK) 30S ribosomal protein S11 [4] (data from MRSA252) SACOL2215 (rpsM) 30S ribosomal protein S13 [4] (data from MRSA252) SACOL1292 (rpsO) 30S ribosomal protein S15 [4] (data from MRSA252) SACOL1254 (rpsP) 30S ribosomal protein S16 [4] (data from MRSA252) SACOL2230 (rpsQ) 30S ribosomal protein S17 [4] (data from MRSA252) SACOL2235 (rpsS) 30S ribosomal protein S19 [4] (data from MRSA252) SACOL0095 (spa) immunoglobulin G binding protein A precursor [4] (data from MRSA252) SACOL1449 (sucA) 2-oxoglutarate dehydrogenase E1 component [4] (data from MRSA252) SACOL1448 (sucB) dihydrolipoamide succinyltransferase [4] (data from MRSA252) SACOL1262 (sucC) succinyl-CoA synthetase subunit beta [4] (data from MRSA252) SACOL1263 (sucD) succinyl-CoA synthetase subunit alpha [4] (data from MRSA252) SACOL1722 (tig) trigger factor [4] (data from MRSA252) SACOL1377 (tkt) transketolase [4] (data from MRSA252) SACOL1155 (trxA) thioredoxin [4] (data from MRSA252) SACOL1276 (tsf) elongation factor Ts [4] (data from MRSA252) SACOL0594 (tuf) elongation factor Tu [4] (data from MRSA252) SACOL2104 (upp) uracil phosphoribosyltransferase [4] (data from MRSA252) SACOL0019 (yycF) DNA-binding response regulator YycF [4] (data from MRSA252) SACOL0303 5'-nucleotidase [4] (data from MRSA252) SACOL0564 pyridoxal biosynthesis lyase PdxS [4] (data from MRSA252) SACOL0617 hexulose-6-phosphate synthase [4] (data from MRSA252) SACOL0688 ABC transporter substrate-binding protein [4] (data from MRSA252) SACOL0731 LysR family transcriptional regulator [4] (data from MRSA252) SACOL0944 NADH dehydrogenase [4] (data from MRSA252) SACOL0973 fumarylacetoacetate hydrolase [4] (data from MRSA252) SACOL1098 hypothetical protein [4] (data from MRSA252) SACOL1230 ribosomal RNA large subunit methyltransferase N [4] (data from MRSA252) SACOL1294 metallo-beta-lactamase [4] (data from MRSA252) SACOL1753 universal stress protein [4] (data from MRSA252) SACOL1759 universal stress protein [4] (data from MRSA252) SACOL1777 serine protease HtrA [4] (data from MRSA252) SACOL1801 dipeptidase PepV [4] (data from MRSA252) SACOL1952 ferritins family protein [4] (data from MRSA252) SACOL2173 alkaline shock protein 23 [4] (data from MRSA252) SACOL2569 1-pyrroline-5-carboxylate dehydrogenase [4] (data from MRSA252)
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Dörte Becher, Kristina Hempel, Susanne Sievers, Daniela Zühlke, Jan Pané-Farré, Andreas Otto, Stephan Fuchs, Dirk Albrecht, Jörg Bernhardt, Susanne Engelmann, Uwe Völker, Jan Maarten van Dijl, Michael Hecker
A proteomic view of an important human pathogen--towards the quantification of the entire Staphylococcus aureus proteome.
PLoS One: 2009, 4(12);e8176
[PubMed:19997597] [WorldCat.org] [DOI] (I e) - ↑ Andreas Otto, Jan Maarten van Dijl, Michael Hecker, Dörte Becher
The Staphylococcus aureus proteome.
Int J Med Microbiol: 2014, 304(2);110-20
[PubMed:24439828] [WorldCat.org] [DOI] (I p) - ↑ Daniela Zühlke, Kirsten Dörries, Jörg Bernhardt, Sandra Maaß, Jan Muntel, Volkmar Liebscher, Jan Pané-Farré, Katharina Riedel, Michael Lalk, Uwe Völker, Susanne Engelmann, Dörte Becher, Stephan Fuchs, Michael Hecker
Costs of life - Dynamics of the protein inventory of Staphylococcus aureus during anaerobiosis.
Sci Rep: 2016, 6;28172
[PubMed:27344979] [WorldCat.org] [DOI] (I e) - ↑ Jump up to: 4.000 4.001 4.002 4.003 4.004 4.005 4.006 4.007 4.008 4.009 4.010 4.011 4.012 4.013 4.014 4.015 4.016 4.017 4.018 4.019 4.020 4.021 4.022 4.023 4.024 4.025 4.026 4.027 4.028 4.029 4.030 4.031 4.032 4.033 4.034 4.035 4.036 4.037 4.038 4.039 4.040 4.041 4.042 4.043 4.044 4.045 4.046 4.047 4.048 4.049 4.050 4.051 4.052 4.053 4.054 4.055 4.056 4.057 4.058 4.059 4.060 4.061 4.062 4.063 4.064 4.065 4.066 4.067 4.068 4.069 4.070 4.071 4.072 4.073 4.074 4.075 4.076 4.077 4.078 4.079 4.080 4.081 4.082 4.083 4.084 4.085 4.086 4.087 4.088 4.089 4.090 4.091 4.092 4.093 4.094 4.095 4.096 4.097 4.098 4.099 4.100 4.101 4.102 4.103 4.104 4.105 4.106 4.107 4.108 4.109 4.110 4.111 4.112 4.113 4.114 4.115 4.116 4.117 4.118 4.119 Artem Cherkasov, Michael Hsing, Roya Zoraghi, Leonard J Foster, Raymond H See, Nikolay Stoynov, Jihong Jiang, Sukhbir Kaur, Tian Lian, Linda Jackson, Huansheng Gong, Rick Swayze, Emily Amandoron, Farhad Hormozdiari, Phuong Dao, Cenk Sahinalp, Osvaldo Santos-Filho, Peter Axerio-Cilies, Kendall Byler, William R McMaster, Robert C Brunham, B Brett Finlay, Neil E Reiner
Mapping the protein interaction network in methicillin-resistant Staphylococcus aureus.
J Proteome Res: 2011, 10(3);1139-50
[PubMed:21166474] [WorldCat.org] [DOI] (I p)