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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002179000
- symbol?: sle1
- synonym:
- description?: N-acetylmuramoyl-L-alanine amidase
- N-acetylmuramoyl-L-alanine amidase
- autolysin
- CHAP domain-contain protein
- LysM domain-containing protein
- N-acetylmuramoyl-L-alanine amidase AAA precursor
- N-acetylmuramoyl-L-alanine amidase sle1
- Autolysin precursor
- CHAP domain-containing protein
- endopeptidase lytE
- LysM family autolysin
- muramidase-2 (1,4-beta-N-acetylmuramoylhydrolase) (Peptidoglycan hydrolase) (Pg-hydrolase 2)(Lysozyme)
- N-acetylmuramyl-L-alanine amidase Sle1
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2683227..2684554
- synteny block?: BlockID0014800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0440
08BA02176:
C248_0514
11819-97:
MS7_0438
6850:
RSAU_000398
71193:
ST398NM01_0530
ECT-R 2:
ECTR2_398
ED133:
SAOV_0482
ED98:
SAAV_0407
HO 5096 0412:
SAEMRSA15_03900
JH1:
SaurJH1_0499
JH9:
SaurJH9_0486
JKD6008:
SAA6008_00468
JKD6159:
SAA6159_00414
LGA251:
SARLGA251_03980
M013:
M013TW_0429
MRSA252:
SAR0464
MSHR1132:
SAMSHR1132_04090
MSSA476:
SAS0422
Mu3:
SAHV_0462 (sle1)
Mu50:
SAV0465
MW2:
MW0419
RF122:
SAB0414
ST398:
SAPIG0530
T0131:
SAT0131_00505
TCH60:
HMPREF0772_10058 (amiD)
TW20:
SATW20_05330
USA300_TCH1516:
USA300HOU_0465
VC40:
SAVC_01910
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
N315 MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
NCTC8325 MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
Newman MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
USA300_FPR3757 MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
************************************************************
COL LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
N315 LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
NCTC8325 LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
Newman LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
USA300_FPR3757 LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
************************************************************
COL LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
N315 LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
NCTC8325 LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
Newman LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
USA300_FPR3757 LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
************************************************************
COL KIMSLNGLNNFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF
N315 KIMSLNGLNNFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF
NCTC8325 KIMSLNGLNNFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF
Newman KIMSLNGLNNFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF
USA300_FPR3757 KIMSLNGLNNFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF
************************************************************
COL NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNND
N315 NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNND
NCTC8325 NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNND
Newman NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNND
USA300_FPR3757 NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNND
************************************************************
COL GSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
N315 GSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
NCTC8325 GSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
Newman GSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
USA300_FPR3757 GSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
**********************************