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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005772000
- symbol?: —
- synonym:
- description?: CHAP domain-containing protein
- CHAP domain-containing protein
- secretory antigen precursor SsaA
- secretory antigen precursor SsaA, putative
- secretory antigen SsaA
- staphyloxanthin biosynthesis protein
- CHAP protein
- exported secretory antigen precursor
- N-acetylmuramoyl-L-alanine amidase Sle1
- secretory antigen ssaA2
- Secretory antigen SsaA-like protein
- staphylococcal secretory antigen ssaA
- staphyloxanthin biosynthesis protein, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5863092..5863598
- synteny block?: BlockID0045180
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2242 (ssaA)
08BA02176:
C248_2343
11819-97:
MS7_2321
6850:
RSAU_002136 (ssaA2)
71193:
ST398NM01_2354
ECT-R 2:
ECTR2_2163
ED133:
SAOV_2343
ED98:
SAAV_2365
HO 5096 0412:
SAEMRSA15_22010
JH1:
SaurJH1_2370
JH9:
SaurJH9_2327
JKD6008:
SAA6008_02339 (ssaA)
JKD6159:
SAA6159_02207 (ssaA)
LGA251:
SARLGA251_20860
M013:
M013TW_2260
MRSA252:
SAR2388
MSHR1132:
SAMSHR1132_21280
MSSA476:
SAS2194
Mu3:
SAHV_2288
Mu50:
SAV2304
MW2:
MW2222 (ssaA)
RF122:
SAB2176
ST398:
SAPIG2354
T0131:
SAT0131_02482
TCH60:
HMPREF0772_10894
TW20:
SATW20_24340
USA300_TCH1516:
USA300HOU_2285 (ssaA)
VC40:
SAVC_10375
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKLVTATTLTAGIGTALVGQAYHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHS
N315 MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHS
NCTC8325 MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHS
Newman MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHS
USA300_FPR3757 MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHS
**********************:*************************************
COL GNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFG
N315 GNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFG
NCTC8325 GNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFG
Newman GNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFG
USA300_FPR3757 GNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFG
************************************************************
COL HVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
N315 HVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
NCTC8325 HVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
Newman HVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
USA300_FPR3757 HVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
**********************************************