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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005767000
- symbol?: ssaA
- synonym:
- description?: CHAP domain-containing protein
- CHAP domain-containing protein
- secretory antigen precursor SsaA
- secretory antigen
- secretory antigen precursor SsaA, putative
- staphyloxanthin biosynthesis protein
- Staphylococcal secretory antigen ssaA2
- secretory antigen precursor SsaA, putative autolysin
- Secretory antigen precursor SsaA_1
- secretory antigen precursor SsaA-like protein
- secretory antigen SsaA-like protein
- staphylococcal secretory antigen, Ssa2
- staphylococcal secretory antigen ssaA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5858302..5859120
- synteny block?: BlockID0045130
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2237 (ssaA)
08BA02176:
C248_2339 (ssaA2)
11819-97:
MS7_2317
6850:
RSAU_002132 (ssaA3)
71193:
ST398NM01_2350
ECT-R 2:
ECTR2_2159
ED133:
SAOV_2339
ED98:
SAAV_2361
HO 5096 0412:
SAEMRSA15_21960
JH1:
SaurJH1_2366
JH9:
SaurJH9_2323
JKD6008:
SAA6008_02335 (ssaA_1)
JKD6159:
SAA6159_02203 (ssa2)
LGA251:
SARLGA251_20820
M013:
M013TW_2256
MRSA252:
SAR2383
MSHR1132:
SAMSHR1132_21240
MSSA476:
SAS2189
Mu3:
SAHV_2283 (ssaA)
Mu50:
SAV2299 (ssaA)
MW2:
MW2217
RF122:
SAB2172
ST398:
SAPIG2350
T0131:
SAT0131_02478
TCH60:
HMPREF0772_10899
TW20:
SATW20_24300
USA300_TCH1516:
USA300HOU_2280
VC40:
SAVC_10355
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYSYTYTIDAQGNYHYTWK
N315 MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYSYTYTIDAQGNYHYTWK
NCTC8325 MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYSYTYTIDAQGNYHYTWK
Newman MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYSYTYTIDAQGNYHYTWK
USA300_FPR3757 MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYSYTYTIDAQGNYHYTWK
************************************************************
COL GNWHPSQLNQDNGYYSYYYYNGYNNYNNYNNGYSYNNYSRYNNYSNNNQSYNYNNYNSYN
N315 GNWHPSQLNQDNGYYSYYYYNGYNNYNNYNNGYSYNNYSRYNNYSNNNQSYNYNNYNSYN
NCTC8325 GNWHPSQLNQDNGYYSYYYYNGYNNYNNYNNGYSYNNYSRYNNYSNNNQSYNYNNYNSYN
Newman GNWHPSQLNQDNGYYSYYYYNGYNNYNNYNNGYSYNNYSRYNNYSNNNQSYNYNNYNSYN
USA300_FPR3757 GNWHPSQLNQDNGYYSYYYYNGYNNYNNYNNGYSYNNYSRYNNYSNNNQSYNYNNYNSYN
************************************************************
COL TNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVFDRVG
N315 TNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVFDRVG
NCTC8325 TNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVFDRVG
Newman TNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVFDRVG
USA300_FPR3757 TNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVFDRVG
************************************************************
COL GKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQTTQGAYGHVAYVESVNSNGSVRVSE
N315 GKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQTTQGAYGHVAYVESVNSNGSVRVSE
NCTC8325 GKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQTTQGAYGHVAYVESVNSNGSVRVSE
Newman GKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQTTQGAYGHVAYVESVNSNGSVRVSE
USA300_FPR3757 GKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQTTQGAYGHVAYVESVNSNGSVRVSE
************************************************************
COL MNYGYGPGVVTSRTISASQAAGYNFIH
N315 MNYGYGPGVVTSRTISASQAAGYNFIH
NCTC8325 MNYGYGPGVVTSRTISASQAAGYNFIH
Newman MNYGYGPGVVTSRTISASQAAGYNFIH
USA300_FPR3757 MNYGYGPGVVTSRTISASQAAGYNFIH
***************************