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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006202000
- symbol?: —
- synonym:
- description?: CHAP domain-containing protein
- CHAP domain-containing protein
- LysM domain-containing protein
- secretory antigen SsaA, putative
- secretory antigen SsaA-like protein
- CHAP domain protein
- CHAP protein
- N-acetylmuramoyl-L-alanine amidase
- SceB
- secretory antigen precursor SsaA
- Secretory antigen SsaA
- secretory antigen ssaA2
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6263384..6263815
- synteny block?: BlockID0049260
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2480
08BA02176:
C248_2601
11819-97:
MS7_2549
6850:
RSAU_002384 (ssaA4)
71193:
ST398NM01_2594
ECT-R 2:
ECTR2_2396
ED133:
SAOV_2588
ED98:
SAAV_2610
HO 5096 0412:
SAEMRSA15_24470
JH1:
SaurJH1_2620
JH9:
SaurJH9_2567
JKD6008:
SAA6008_02581
JKD6159:
SAA6159_02440
LGA251:
SARLGA251_23190
M013:
M013TW_2516
MRSA252:
SAR2624
MSHR1132:
SAMSHR1132_23640
MSSA476:
SAS2430
Mu3:
SAHV_2528
Mu50:
SAV2544
MW2:
MW2465
RF122:
SAB2418
ST398:
SAPIG2594
T0131:
SAT0131_02751
TCH60:
HMPREF0772_10647 (amiD2)
TW20:
SATW20_26650
USA300_TCH1516:
USA300HOU_2536
VC40:
SAVC_11595
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQCTWWAFKRRAQVGKPV
N315 MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQCTWWAFKRRAQVGKPV
NCTC8325 MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQCTWWAFKRRAQVGKPV
Newman MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQCTWWAFKRRAQVGKPV
USA300_FPR3757 MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQCTWWAFKRRAQVGKPV
************************************************************
COL SNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVAVVEQVYKNGSIKVSEYNF
N315 SNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVAVVEQVYKNGSIKVSEYNF
NCTC8325 SNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVAVVEQVYKNGSIKVSEYNF
Newman SNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVAVVEQVYKNGSIKVSEYNF
USA300_FPR3757 SNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVAVVEQVYKNGSIKVSEYNF
************************************************************
COL YRPLKYNTRVLSKKAARNFNYIY
N315 YRPLKYNTRVLSKKAARNFNYIY
NCTC8325 YRPLKYNTRVLSKKAARNFNYIY
Newman YRPLKYNTRVLSKKAARNFNYIY
USA300_FPR3757 YRPLKYNTRVLSKKAARNFNYIY
***********************