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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1951 [new locus tag: SAUSA300_RS10705 ]
- pan locus tag?: SAUPAN001403000
- symbol: SAUSA300_1951
- pan gene symbol?: —
- synonym:
- product: phiPVL ORF052-like protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_1951 [new locus tag: SAUSA300_RS10705 ]
- symbol: SAUSA300_1951
- product: phiPVL ORF052-like protein
- replicon: chromosome
- strand: -
- coordinates: 2112764..2113000
- length: 237
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3914533 NCBI
- RefSeq: YP_494602 NCBI
- BioCyc: see SAUSA300_RS10705
- MicrobesOnline: 1293466 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGAATAACCGCGAACAAATCGAACAATCAGTTATCAGTGCTAGCGCGTATAACGGCAAT
GACACAGAGGGATTGCTAAAAGAGATTGAAGACGTGTATAAGAAAGCGCAAGCGTTTGAT
GAAATTCGCGAAGCTATTAATGCGCAATGGGTTGAGTATCCAGAAGACTGGGCGTCAGAG
GTTTTGAGAGAAGTAAGAGAGCTTGAATATGAGGAGGAACAGGAAAATGAAAATTAA60
120
180
237
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_1951 [new locus tag: SAUSA300_RS10705 ]
- symbol: SAUSA300_1951
- description: phiPVL ORF052-like protein
- length: 78
- theoretical pI: 3.76693
- theoretical MW: 9226.82
- GRAVY: -1.10256
⊟Function[edit | edit source]
- TIGRFAM: hercynine metabolism small protein (TIGR04374; HMM-score: 15.1)PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family (TIGR04063; EC 2.4.-.-; HMM-score: 14.1)
- TheSEED :
- Phage phi 11 orf23 protein homolog
- PFAM: no clan defined DUF1024; Protein of unknown function (DUF1024) (PF06260; HMM-score: 93.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: -1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.008655
- TAT(Tat/SPI): 0.00151
- LIPO(Sec/SPII): 0.001235
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEIREAINAQWVEYPEDWASEVLREVRELEYEEEQENEN
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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