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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA2179 [new locus tag: SA_RS12505 ]
- pan locus tag?: SAUPAN005922000
- symbol: SA2179
- pan gene symbol?: nreC
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA2179 [new locus tag: SA_RS12505 ]
- symbol: SA2179
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2447720..2448373
- length: 654
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1125107 NCBI
- RefSeq: NP_375502 NCBI
- BioCyc: see SA_RS12505
- MicrobesOnline: 104528 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601TTGAAAATAGTCATTGCCGATGATCACGCTGTTGTCCGTACGGGGTTCTCTATGATTTTA
AATTATCAAAATGATATGGAAGTTGTTGCAACGGCTGCAGATGGCGTCGAAGCTTACCAA
AAAGTAATGGAATATAAACCTGATGTGTTACTAATGGATTTAAGTATGCCACCAGGTGAG
TCAGGTCTTATCGCTACGAGTAAAATTGCTGACAGTTTTCCTGAAACTAAAATACTAATA
TTAACAATGTTTGATGATGAGGAGTATTTGTTCCATGTGTTGCGTAATGGTGCGAAAGGT
TACATATTGAAAAATGCACCTGATGAACAATTATTGTTAGCTATTCGAACTGTATATAAA
GGTGAAACATATGTAGATATGAAACTTACAACATCTTTAGTGAATGAATTTGTATCTAAT
TCAAATCAGGACACTGCAAACACAACAGATCCTTTTAAAATCTTATCAAAACGAGAACTA
GAAATATTGCCACTTATTGCCAAAGGTTACGGGAATAAAGAAATTGCAGAGAAATTATTT
GTATCTGTGAAAACAGTAGAAGCACATAAGACGCATATTATGACAAAGCTTGGCTTAAAG
AGTAAACCTGAGCTAGTTGAATATGCATTGAAAAAGAAATTATTAGAGTTTTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA2179 [new locus tag: SA_RS12505 ]
- symbol: SA2179
- description: hypothetical protein
- length: 217
- theoretical pI: 5.39357
- theoretical MW: 24368.2
- GRAVY: -0.0778802
⊟Function[edit | edit source]
- ⊞TIGRFAM: Cellular processes Sporulation and germination sporulation transcription factor Spo0A (TIGR02875; HMM-score: 55)and 13 more
- TheSEED :
- response regulator
- ⊞PFAM: CheY (CL0304) Response_reg; Response regulator receiver domain (PF00072; HMM-score: 86.8)HTH (CL0123) GerE; Bacterial regulatory proteins, luxR family (PF00196; HMM-score: 76.9)and 7 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effector: NreB (sensor histidine kinase) sensing nitrate and nitrite
- ⊞genes regulated by NreC*, TF important in Nitrate and nitrite respirationRegPrecise
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKIVIADDHAVVRTGFSMILNYQNDMEVVATAADGVEAYQKVMEYKPDVLLMDLSMPPGESGLIATSKIADSFPETKILILTMFDDEEYLFHVLRNGAKGYILKNAPDEQLLLAIRTVYKGETYVDMKLTTSLVNEFVSNSNQDTANTTDPFKILSKRELEILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLGLKSKPELVEYALKKKLLEF
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available