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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL1145 [new locus tag: SACOL_RS05845 ]
- pan locus tag?: SAUPAN003367000
- symbol: srtB
- pan gene symbol?: srtB
- synonym:
- product: sortase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL1145 [new locus tag: SACOL_RS05845 ]
- symbol: srtB
- product: sortase
- replicon: chromosome
- strand: +
- coordinates: 1152964..1153698
- length: 735
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3237661 NCBI
- RefSeq: YP_186008 NCBI
- BioCyc: see SACOL_RS05845
- MicrobesOnline: 912612 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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721ATGAGAATGAAGCGATTTTTAACTATTGTACAAATTTTATTGGTTGTAATTATTATCATT
TTTGGTTACAAAATTGTTCAAACATATATTGAAGACAAGCAAGAACGCGCAAATTATGAG
AAATTACAACAAAAATTTCAAATGCTGATGAGCAAACATCAAGAACATGTGAGACCACAA
TTTGAATCACTTGAAAAAATAAATAAAGACATTGTTGGATGGATAAAATTATCAGGAACA
TCATTAAATTATCCAGTACTACAAGGTAAGACAAATCACGATTATTTAAATTTAGATTTT
GAGCGAGAACATCGACGTAAAGGTAGTATTTTTATGGATTTTAGAAATGAATTGAAGAAT
TTAAATCATAATACTATTTTATACGGGCACCATGTCGGTGATAATACGATGTTTGATGTG
TTAGAAGATTATTTAAAGCAATCGTTTTATGAAAAACACAAGATAATTGAATTTGACAAT
AAATATGGTAAATATCAATTGCAAGTATTTAGTGCATATAAAACTACTACTAAAGATAAT
TACATACGTACAGATTTTGAAAATGATCAAGATTATCAACAATTTTTAGATGAGACAAAA
CGTAAATCTGTAATTAATTCAGATGTTAATGTAACGGTAAAAGATAGAATAATGACTTTA
TCAACGTGCGAAGATGCATATAGTGAAACGACGAAAAGAATTGTTGTTGTCGCAAAAATA
ATTAAGGTAAGTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL1145 [new locus tag: SACOL_RS05845 ]
- symbol: SrtB
- description: sortase
- length: 244
- theoretical pI: 9.23648
- theoretical MW: 29163.2
- GRAVY: -0.582787
⊟Function[edit | edit source]
- ⊞TIGRFAM: Cell envelope Other sortase, SrtB family (TIGR03064; EC 3.4.22.71; HMM-score: 304.4)Protein fate Protein and peptide secretion and trafficking sortase, SrtB family (TIGR03064; EC 3.4.22.71; HMM-score: 304.4)and 2 more
- ⊞TheSEED :
- NPQTN specific sortase B
and 1 more - ⊞PFAM: no clan defined Sortase; Sortase domain (PF04203; HMM-score: 67.1)and 5 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDRIMTLSTCEDAYSETTKRIVVVAKIIKVS
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Regulation[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Michelle L Reniere, Eric P Skaar
Staphylococcus aureus haem oxygenases are differentially regulated by iron and haem.
Mol Microbiol: 2008, 69(5);1304-15
[PubMed:18643935] [WorldCat.org] [DOI] (I p)