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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006433000
- symbol?: hisD
- synonym:
- description?: histidinol dehydrogenase
- histidinol dehydrogenase
- histidinol dehydrogenase HisD
- putative histidinol dehydrogenase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6475029..6476279
- synteny block?: BlockID0051400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2618
08BA02176:
C248_2747 (hisD)
11819-97:
MS7_2683 (hisD)
6850:
RSAU_002523 (hisD)
71193:
ST398NM01_2729
ECT-R 2:
ECTR2_2531 (hisD)
ED133:
SAOV_2729c
ED98:
SAAV_2752 (hisD)
HO 5096 0412:
SAEMRSA15_25840 (hisD)
JH1:
SaurJH1_2759
JH9:
SaurJH9_2702
JKD6008:
SAA6008_02737 (hisD)
JKD6159:
SAA6159_02575 (hisD)
LGA251:
SARLGA251_24510 (hisD)
M013:
M013TW_2661
MRSA252:
SAR2760 (hisD)
MSHR1132:
SAMSHR1132_25050
MSSA476:
SAS2563
Mu3:
SAHV_2662
Mu50:
SAV2678
MW2:
MW2597
RF122:
SAB2554c (hisD)
ST398:
SAPIG2729 (hisD)
T0131:
SAT0131_02957
TCH60:
HMPREF0772_10508 (hisD)
TW20:
SATW20_28150 (hisD)
USA300_TCH1516:
USA300HOU_2679 (hisD)
VC40:
SAVC_12265
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPMLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEIS
N315 --MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEIS
NCTC8325 --MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEIS
Newman --MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEIS
USA300_FPR3757 --MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEIS
**********************************************************
COL HEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYV
N315 HEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYV
NCTC8325 HEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYV
Newman HEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYV
USA300_FPR3757 HEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYV
************************************************************
COL PGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAACYITQVDQVFQVGGAQ
N315 PGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAACYITQVNQVFQVGGAQ
NCTC8325 PGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAACYITQVDQVFQVGGAQ
Newman PGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAACYITQVDQVFQVGGAQ
USA300_FPR3757 PGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAACYITQVDQVFQVGGAQ
**************************************************:*********
COL SIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDA
N315 SIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDDTADLDA
NCTC8325 SIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDA
Newman SIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDA
USA300_FPR3757 SIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDA
*****************************************************:******
COL IVYDVFAQAEHDELARTYAISEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHA
N315 IVYDVFAQAEHDELARTYVIGEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHA
NCTC8325 IVYDVFAQAEHDELARTYAISEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHA
Newman IVYDVFAQAEHDELARTYAISEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHA
USA300_FPR3757 IVYDVFAQAEHDELARTYAISEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHA
******************.*.***************************************
COL SNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLP
N315 SNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLP
NCTC8325 SNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLP
Newman SNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLP
USA300_FPR3757 SNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLP
************************************************************
COL TNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQS
N315 TNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQS
NCTC8325 TNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQS
Newman TNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQS
USA300_FPR3757 TNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQS
**********************************************************