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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006371000
- symbol?: —
- synonym:
- description?: PTS mannose transporter subunit IIA
- PTS mannose transporter subunit IIA
- BglG family transcriptional antiterminator
- BglG family transcription antiterminator
- transcriptional antiterminator, BglG family
- transcriptional antiterminator BglG family protein
- Activator of the mannose operon (transcriptional antiterminator), BglG family
- transcription antiterminator, BglG family
- antiterminator transcriptional regulator
- deoR-like helix-turn-helix domain protein
- PRD domain-containing protein
- transcriptional antiterminator BglG
- transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6406819..6408693
- synteny block?: BlockID0050800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2579
08BA02176:
C248_2708
11819-97:
MS7_2645
6850:
RSAU_002483
71193:
ST398NM01_2690
ECT-R 2:
ECTR2_2494
ED133:
SAOV_2689
ED98:
SAAV_2710
HO 5096 0412:
SAEMRSA15_25450
JH1:
SaurJH1_2720
JH9:
SaurJH9_2664
JKD6008:
SAA6008_02699
JKD6159:
SAA6159_02536
LGA251:
SARLGA251_24120
M013:
M013TW_2621
MRSA252:
SAR2719
MSHR1132:
SAMSHR1132_24640
MSSA476:
SAS2526
Mu3:
SAHV_2624
Mu50:
SAV2640
MW2:
MW2561
RF122:
SAB2515
ST398:
SAPIG2690
T0131:
SAT0131_02906
TCH60:
HMPREF0772_10547
TW20:
SATW20_27780
USA300_TCH1516:
USA300HOU_2640
VC40:
SAVC_12080
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVINSNFMDDIIVSIKSKGY
N315 MLDRHLKLLQFFIKNPSKHISSNEIAEHVNVSNRTVRNDIHVINSNFMDDIIVSIKSKGY
NCTC8325 MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVINSNFMDDIIVSIKSKGY
Newman MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVINSNFMDDIIVSIKSKGY
USA300_FPR3757 MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVINSNFMDDIIVSIKSKGY
**************************:*********************************
COL QLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLNDY
N315 QLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLNDY
NCTC8325 QLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLNDY
Newman QLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLNDY
USA300_FPR3757 QLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLNDY
************************************************************
COL FVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPDS
N315 FVRIQQWCQKFNIVLTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPDS
NCTC8325 FVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPDS
Newman FVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPDS
USA300_FPR3757 FVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPDS
*************.**********************************************
COL HQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDSKLISQSCI
N315 HQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDAKLISQSCI
NCTC8325 HQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDSKLISQSCI
Newman HQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDSKLISQSCI
USA300_FPR3757 HQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDSKLISQSCI
***************************************************:********
COL KQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVPFNE
N315 KQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVPFNE
NCTC8325 KQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVPFNE
Newman KQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVPFNE
USA300_FPR3757 KQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVPFNE
************************************************************
COL DSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDIEMS
N315 DSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDIEMS
NCTC8325 DSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDIEMS
Newman DSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDIEMS
USA300_FPR3757 DSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDIEMS
************************************************************
COL EDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINNLSEELSVINTIKLEN
N315 EDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINNLSEELSVINTIKLES
NCTC8325 EDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINNLSEELSVINTIKLEN
Newman EDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINNLSEELSVINTIKLEN
USA300_FPR3757 EDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINNLSEELSVINTIKLEN
***********************************************************.
COL ITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQNPVQA
N315 ITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQNPVQA
NCTC8325 ITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQNPVQA
Newman ITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQNPVQA
USA300_FPR3757 ITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQNPVQA
************************************************************
COL HHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSSTYIGNF
N315 HHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSSTYIGNF
NCTC8325 HHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSSTYIGNF
Newman HHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSSTYIGNF
USA300_FPR3757 HHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSSTYIGNF
************************************************************
COL MAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDD
N315 MAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDD
NCTC8325 MAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDD
Newman MAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDD
USA300_FPR3757 MAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDD
************************************************************
COL DSVNHLCSLDDHSLKQQLFEYLQE
N315 DSVNHLCSLDDHSLKQQLFEYLQE
NCTC8325 DSVNHLCSLDDHSLKQQLFEYLQE
Newman DSVNHLCSLDDHSLKQQLFEYLQE
USA300_FPR3757 DSVNHLCSLDDHSLKQQLFEYLQE
************************