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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006359000
- symbol?: arcR
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- Crp/FNR family transcriptional regulator
- transcriptional regulator, Crp/Fnr family
- transcriptional regulator Crp/Fnr family protein
- Crp family transcriptional regulator
- crp family transcription regulator
- cyclic nucleotide-binding domain-containing protein
- cyclic nucleotide-binding protein
- HTH-type transcriptional regulator ArcR
- putative regulatory protein
- regulatory protein
- Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6394619..6395305
- synteny block?: BlockID0050680
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2570
08BA02176:
C248_2699
11819-97:
MS7_2636 (arcR)
6850:
RSAU_002474 (arcR)
71193:
ST398NM01_2681
ECT-R 2:
ECTR2_2485
ED133:
SAOV_2680c
ED98:
SAAV_2700
HO 5096 0412:
SAEMRSA15_25360
JH1:
SaurJH1_2711
JH9:
SaurJH9_2655
JKD6008:
SAA6008_02690
JKD6159:
SAA6159_02527
LGA251:
SARLGA251_24030 (arcR)
M013:
M013TW_2612
MRSA252:
SAR2710
MSHR1132:
SAMSHR1132_24550
MSSA476:
SAS2517
Mu3:
SAHV_2615
Mu50:
SAV2631
MW2:
MW2552
RF122:
SAB2506c
ST398:
SAPIG2681
T0131:
SAT0131_02897 (dapB)
TCH60:
HMPREF0772_10558
TW20:
SATW20_27690 (arcR)
USA300_TCH1516:
USA300HOU_2631
VC40:
SAVC_12035
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------MGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYTKGQVIYFSPQESSNIY
N315 MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYTKGQVIYFSPQESSNIY
NCTC8325 MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYTKGQVIYFSPQESSNIY
Newman MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYTKGQVIYFSPQESSNIY
USA300_FPR3757 MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYTKGQVIYFSPQESSNIY
:*****************************************************
COL FLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNELCTALTDCTVLGLPRELM
N315 FLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNELCTALTDCTVLGLPRELM
NCTC8325 FLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNELCTALTDCTVLGLPRELM
Newman FLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNELCTALTDCTVLGLPRELM
USA300_FPR3757 FLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNELCTALTDCTVLGLPRELM
************************************************************
COL AFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDRIIKLICHLCQTVGYDQDEFY
N315 AFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDRIIKLLCHLCQTVGYDQDEFY
NCTC8325 AFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDRIIKLICHLCQTVGYDQDEFY
Newman AFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDRIIKLICHLCQTVGYDQDEFY
USA300_FPR3757 AFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDRIIKLICHLCQTVGYDQDEFY
********************************************:***************
COL EIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKDHKNWLVSKHLFNDVCV
N315 EIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKDHKNWLVSKHLFNDVCV
NCTC8325 EIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKDHKNWLVSKHLFNDVCV
Newman EIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKDHKNWLVSKHLFNDVCV
USA300_FPR3757 EIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKDHKNWLVSKHLFNDVCV
******************************************************