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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004913000
- symbol?: gatD
- synonym:
- description?: glutamine amidotransferase
- glutamine amidotransferase
- CobB/CobQ-like glutamine amidotransferase
- cobyric acid synthase
- cobyric acid synthase, putative
- type 1 glutamine amidotransferase
- adenosylcobyric acid synthase (glutamine-hydrolyzing)
- CobB/CobQ domain-containing protein glutamine amidotransferase
- CobB/CobQ-like glutamine amidotransferase domain-containing protein
- cobB/CobQ-like glutamine amidotransferase domain protein
- cobyric acid synthase CobQ
- putative amidotransferase, putative cobyricacid synthase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5102349..5103080
- synteny block?: BlockID0038190
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1847 (cobQ)
08BA02176:
C248_1964
11819-97:
MS7_1926
6850:
RSAU_001778 (cobQ)
71193:
ST398NM01_1984
ECT-R 2:
ECTR2_1762
ED133:
SAOV_1990
ED98:
SAAV_1956
HO 5096 0412:
SAEMRSA15_17980
JH1:
SaurJH1_1979
JH9:
SaurJH9_1945
JKD6008:
SAA6008_01911
JKD6159:
SAA6159_01822
LGA251:
SARLGA251_17730
M013:
M013TW_1927
MRSA252:
SAR1982
MSHR1132:
SAMSHR1132_17350
MSSA476:
SAS1813
Mu3:
SAHV_1876
Mu50:
SAV1891
MW2:
MW1832
RF122:
SAB1823c
ST398:
SAPIG1984
T0131:
SAT0131_02016 (clpP)
TCH60:
HMPREF0772_11252
TW20:
SATW20_18850
USA300_TCH1516:
USA300HOU_1889
VC40:
SAVC_08715
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGG
N315 MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGG
NCTC8325 MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGG
Newman MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGG
USA300_FPR3757 MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGG
************************************************************
COL GSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDF
N315 GSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDF
NCTC8325 GSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDF
Newman GSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDF
USA300_FPR3757 GSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDF
************************************************************
COL YTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTLGHVTFGYGNNDEDKKEGIHY
N315 YTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTLGHVTFGYGNNDEDKKEGIHY
NCTC8325 YTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTLGHVTFGYGNNDEDKKEGIHY
Newman YTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTLGHVTFGYGNNDEDKKEGIHY
USA300_FPR3757 YTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTLGHVTFGYGNNDEDKKEGIHY
************************************************************
COL KNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEIQAKQVLIDRANRQK
N315 KNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEIQAKQVLIDRANRQK
NCTC8325 KNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEIQAKQVLIDRANRQK
Newman KNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEIQAKQVLIDRANRQK
USA300_FPR3757 KNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEIQAKQVLIDRANRQK
************************************************************
COL KSR
N315 KSR
NCTC8325 KSR
Newman KSR
USA300_FPR3757 KSR
***