Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004308000
- symbol?: nrdR
- synonym:
- description?: transcriptional regulator NrdR
- transcriptional regulator NrdR
- transcriptional regulator NrdR, putative
- transcriptional repressor NrdR
- Ribonucleotide reductase transcriptional regulator NrdR
- hypothetical protein0168 protein
- NrdR family transcriptional regulator
- regulatory protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4547434..4547904
- synteny block?: BlockID0033320
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1645 (nrdR)
08BA02176:
C248_1728
11819-97:
MS7_1693 (nrdR)
6850:
RSAU_001544 (nrdR)
71193:
ST398NM01_1740
ECT-R 2:
ECTR2_1526 (nrdR)
ED133:
SAOV_1674
ED98:
SAAV_1676 (nrdR)
HO 5096 0412:
SAEMRSA15_15960
JH1:
SaurJH1_1777 (nrdR)
JH9:
SaurJH9_1743 (nrdR)
JKD6008:
SAA6008_01653 (nrdR)
JKD6159:
SAA6159_01610 (nrdR)
LGA251:
SARLGA251_15780
M013:
M013TW_1699
MRSA252:
SAR1765 (nrdR)
MSHR1132:
SAMSHR1132_15130
MSSA476:
SAS1614 (nrdR)
Mu3:
SAHV_1672 (nrdR)
Mu50:
SAV1686 (nrdR)
MW2:
MW1629 (nrdR)
RF122:
SAB1545c (nrdR)
ST398:
SAPIG1740 (nrdR)
T0131:
SAT0131_01788
TCH60:
HMPREF0772_11465 (nrdR)
TW20:
SATW20_16760
USA300_TCH1516:
USA300HOU_1673 (nrdR)
VC40:
SAVC_07635 (nrdR)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
N315 MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
NCTC8325 MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
Newman MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
USA300_FPR3757 MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
************************************************************
COL FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
N315 FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
NCTC8325 FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
Newman FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
USA300_FPR3757 FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
************************************************************
COL QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
N315 QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
NCTC8325 QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
Newman QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
USA300_FPR3757 QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
************************************