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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004218000
- symbol?: —
- synonym:
- description?: tetratricopeptide repeat protein
- tetratricopeptide repeat protein
- TPR domain-containing protein
- TPR domain protein
- Tetratricopeptide (TPR) domain protein
- anaphase-promoting complex, cyclosome, subunit 3 family protein
- O-linked GlcNAc transferase
- tetratricopeptide domain-containing protein
- Tetratricopeptide repeat (TPR) family protein
- tetratricopeptide repeat family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4470339..4471007
- synteny block?: BlockID0032460
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1578
08BA02176:
C248_1662
11819-97:
MS7_1636
6850:
RSAU_001482
71193:
ST398NM01_1684
ECT-R 2:
ECTR2_1469
ED133:
SAOV_1618
ED98:
SAAV_1613
HO 5096 0412:
SAEMRSA15_15380
JH1:
SaurJH1_1711
JH9:
SaurJH9_1677
JKD6008:
SAA6008_01590
JKD6159:
SAA6159_01553
LGA251:
SARLGA251_15230
M013:
M013TW_1641
MRSA252:
SAR1699
MSHR1132:
SAMSHR1132_14570
MSSA476:
SAS1556
Mu3:
SAHV_1607
Mu50:
SAV1620
MW2:
MW1570
RF122:
SAB1491c
ST398:
SAPIG1684
T0131:
SAT0131_01717
TCH60:
HMPREF0772_11521
TW20:
SATW20_16150
USA300_TCH1516:
USA300HOU_1620
VC40:
SAVC_07350
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIDQQTIYQYIQNGKIEEALQALFGNIEENPTIIENYINAGIVLADANEIEKAERFFQKA
N315 MIDQQTIYQYIQNGKIEEALQALFGNIEEDPTIIENYINAGIVLADANEIEKAERFFQKA
NCTC8325 MIDQQTIYQYIQNGKIEEALQALFGNIEENPTIIENYINAGIVLADANEIEKAERFFQKA
Newman MIDQQTIYQYIQNGKIEEALQALFGNIEENPTIIENYINAGIVLADANEIEKAERFFQKA
USA300_FPR3757 MIDQQTIYQYIQNGKIEEALQALFGNIEENPTIIENYINAGIVLADANEIEKAERFFQKA
*****************************:******************************
COL LTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKL
N315 LTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKL
NCTC8325 LTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKL
Newman LTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKL
USA300_FPR3757 LTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKL
***********:************************************************
COL ALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLA
N315 ALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLA
NCTC8325 ALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLA
Newman ALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLA
USA300_FPR3757 ALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLA
************************************************************
COL LFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE
N315 LFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE
NCTC8325 LFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE
Newman LFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE
USA300_FPR3757 LFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE
******************************************