PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002250000
• symbol^?: tilS
• synonym:
• description^?: tRNA(Ile)-lysidine synthetase

  descriptions from strain specific annotations:

  • tRNA(Ile)-lysidine synthetase
  • tRNA(Ile)-lysidine synthetase, putative
  • tRNA lysidine(34) synthetase TilS
  • protein TilS
  • tRNA(Ile)-lysidine synthase
  • tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase)
• strand^?: +
• coordinates^?: 2757107..2758402
• synteny block^?: BlockID0015490
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0553
N315:
SA0467
NCTC8325:
SAOUHSC_00484
Newman:
NWMN_0471 (tilS)
USA300_FPR3757:
SAUSA300_0487
04-02981:
SA2981_0484
08BA02176:
C248_0565
11819-97:
MS7_0486 (tilS)
6850:
RSAU_000448 (tilS)
71193:
ST398NM01_0575
ECT-R 2:
ECTR2_449 (tilS)
ED133:
SAOV_0531
ED98:
SAAV_0456
HO 5096 0412:
SAEMRSA15_04350
JH1:
SaurJH1_0544
JH9:
SaurJH9_0531
JKD6008:
SAA6008_00514 (tilS)
JKD6159:
SAA6159_00460 (tilS)
LGA251:
SARLGA251_04430 (tilS)
M013:
M013TW_0481
MRSA252:
SAR0510
MSHR1132:
SAMSHR1132_04530
MSSA476:
SAS0466
Mu3:
SAHV_0506
Mu50:
SAV0509
MW2:
MW0464
RF122:
SAB0458
ST398:
SAPIG0575
T0131:
SAT0131_00555 (menC)
TCH60:
HMPREF0772_10010
TW20:
SATW20_05770 (tilS)
USA300_TCH1516:
USA300HOU_0503
VC40:
SAVC_02130

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEAR
  N315            MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEAR
  NCTC8325        MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEAR
  Newman          MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEAR
  USA300_FPR3757  MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEAR
                  ************************************************************
  
  COL             FLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHL
  N315            FLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHL
  NCTC8325        FLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHL
  Newman          FLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHL
  USA300_FPR3757  FLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHL
                  ************************************************************
  
  COL             DDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERYHIPYFED
  N315            DDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERYHIPYFED
  NCTC8325        DDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERYHIPYFED
  Newman          DDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERYHIPYFED
  USA300_FPR3757  DDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERYHIPYFED
                  ************************************************************
  
  COL             ESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQWHDEQYDILQYSAKQFIQEFVKF
  N315            ESNKDNKYIRNDIRNRIIPAIDENNQLKVSHLLKLKQWHDEQYDILQYSAKQFIQEFVKF
  NCTC8325        ESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQWHDEQYDILQYSAKQFIQEFVKF
  Newman          ESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQWHDEQYDILQYSAKQFIQEFVKF
  USA300_FPR3757  ESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQWHDEQYDILQYSAKQFIQEFVKF
                  ********:***************************************************
  
  COL             DEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYELFNISAKTYEEWFKQFSSKKAQFSI
  N315            DEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYELFNISAKTYEEWFKQFSSKKAQFSI
  NCTC8325        DEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYELFNISAKTYEEWFKQFSSKKAQFSI
  Newman          DEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYELFNISAKTYEEWFKQFSSKKAQFSI
  USA300_FPR3757  DEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYELFNISAKTYEEWFKQFSSKKAQFSI
                  ************************************************************
  
  COL             NLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIKKPGNYIFNKYRLEIHSNLPKCLFPLTV
  N315            NLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIKKPGNYFFNKYRLEIHSNLPKCLFPLTV
  NCTC8325        NLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIKKPGNYIFNKYRLEIHSNLPKCLFPLTV
  Newman          NLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIKKPGNYIFNKYRLEIHSNLPKCLFPLTV
  USA300_FPR3757  NLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIKKPGNYIFNKYRLEIHSNLPKCLFPLTV
                  **************************************:*********************
  
  COL             RTRQSGDTFKLNGRDGYKKVNRLFIDCKVPQWVRDQMPIVLDKQQRIIAVGDLYQQQTIK
  N315            RTRQSGDTFKLNGRDGYKKVNRLFIDCKVPQWVRDQMPIVLDKQQRIIAVGDLYQQQTIK
  NCTC8325        RTRQSGDTFKLNGRDGYKKVNRLFIDCKVPQWVRDQMPIVLDKQQRIIAVGDLYQQQTIK
  Newman          RTRQSGDTFKLNGRDGYKKVNRLFIDCKVPQWVRDQMPIVLDKQQRIIAVGDLYQQQTIK
  USA300_FPR3757  RTRQSGDTFKLNGRDGYKKVNRLFIDCKVPQWVRDQMPIVLDKQQRIIAVGDLYQQQTIK
                  ************************************************************
  
  COL             KWIIISKNGDE
  N315            KWIIISKNGDE
  NCTC8325        KWIIISKNGDE
  Newman          KWIIISKNGDE
  USA300_FPR3757  KWIIISKNGDE
                  ***********