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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004815000
- symbol?: trnaM
- synonym:
- description?: tRNA-Met
- strand?: -
- coordinates?: 5010944..5011017
- synteny block?: BlockID0037450
- occurrence?: in 100% of 34 strains
tRNA-MetCAU (elongator)
Modifications: [1]
• uridine(17) → dihydrouridine(17)
• uridine(20a) → dihydrouridine(20a)
• uridine(20b) → dihydrouridine(20b)
• cytidine(34) → N(4)-acetylcytidine(34)
• adenosine(37) → N(6)-methyladenosine(37)
• uridine(54) → thymidine(54)
Transfer RNA coding elements are organized in up to eleven loci in Staphylococcus aureus. This tRNA-MetCAU is from Locus V and is the unique tRNA-Met elongator used to add methionine within mRNA coding sequences. As such, it is the only tRNA-Met to receive several of the posttranslational modifications.
⊟Orthologs[edit | edit source]
04-02981:
SA2981_tRNA44
08BA02176:
C248_1919 (trnaM)
11819-97:
MS7_1881
6850:
RSAU_001734
71193:
ST398NM01_r028
ECT-R 2:
ECTR2_1719
ED133:
SAOV_1873c
ED98:
SAAV_1898
HO 5096 0412:
SAEMRSA15_tRNA0042
JH1:
SaurJH1_R0053
JH9:
SaurJH9_R0053
JKD6008:
SAA6008_t41
JKD6159:
SAA6159_t40
JSNZ:
JSNZ_001874
LGA251:
SARLGA251_t48
M013:
M013TW_1880
MRSA252:
SARt041
MSHR1132:
SAMSHR1132_t33
MSSA476:
SASt041
Mu3:
SAHV_t0042
Mu50:
SAVtRNA41
MW2:
MWtRNA41
RF122:
SAB_t40
ST398:
SAPIG1942
T0131:
SAT0131_t029
TCH60:
HMPREF0772_t10032
TW20:
SATW20_t410
USA300_TCH1516:
USA300HOU_t0041
VC40:
SAVC_t12547
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Laura Antoine, Philippe Wolff, Eric Westhof, Pascale Romby, Stefano Marzi
Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS.
Biochimie: 2019, 164;60-69
[PubMed:31295507] [WorldCat.org] [DOI] (I p)