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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001155000
- symbol?: rbsD
- synonym:
- description?: D-ribose pyranase
- D-ribose pyranase
- ribose permease ABC transport protein, putative
- high affinity ribose transport protein rbsD
- Ribose ABC transport system, high affinity permease RbsD
- D-ribose mutarotase
- putative ribose transport protein
- RbsD / FucU transport protein family
- ribose ABC superfamily ATP binding cassette transporter, membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1427056..1427460
- synteny block?: BlockID0006750
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0269 (rbsD)
08BA02176:
C248_0259 (rbsD)
11819-97:
MS7_0259 (rbsD)
6850:
RSAU_000216 (rbsD)
71193:
ST398NM01_0284
ECT-R 2:
ECTR2_230
ED133:
SAOV_0210
ED98:
SAAV_0237
HO 5096 0412:
SAEMRSA15_02290
JH1:
SaurJH1_0260
JH9:
SaurJH9_0254
JKD6008:
SAA6008_00244 (rbsD)
JKD6159:
SAA6159_00248 (rbsD)
LGA251:
SARLGA251_02340
M013:
M013TW_0250
MRSA252:
SAR0267
MSHR1132:
SAMSHR1132_02360
MSSA476:
SAS0246
Mu3:
SAHV_0268 (rbsD)
Mu50:
SAV0269 (rbsD)
MW2:
MW0245 (rbsD)
RF122:
SAB0209c
ST398:
SAPIG0284
T0131:
SAT0131_00264
TCH60:
HMPREF0772_10231 (rbsD)
TW20:
SATW20_02720
USA300_TCH1516:
USA300HOU_0281 (rbsD)
VC40:
SAVC_01090
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE
N315 MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE
NCTC8325 MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE
Newman MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE
USA300_FPR3757 MKKSAILNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE
*****:******************************************************
COL EMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGET
N315 EMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGET
NCTC8325 EMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGET
Newman EMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGET
USA300_FPR3757 EMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGET
************************************************************
COL TPYSNIALESNVTF
N315 TPYSNIALESNVTF
NCTC8325 TPYSNIALESNVTF
Newman TPYSNIALESNVTF
USA300_FPR3757 TPYSNIALESNVTF
**************