Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001154000
- symbol?: rbsK
- synonym:
- description?: ribokinase
- ribokinase
- ribokinase, putative
- putative ribokinase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1426110..1427027
- synteny block?: BlockID0006740
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0268 (rbsK)
08BA02176:
C248_0258
11819-97:
MS7_0258 (rbsK)
6850:
RSAU_000215 (rbsK)
71193:
ST398NM01_0283
ECT-R 2:
ECTR2_229 (rbsK)
ED133:
SAOV_0209 (rbsK)
ED98:
SAAV_0236 (rbsK)
HO 5096 0412:
SAEMRSA15_02280
JH1:
SaurJH1_0259
JH9:
SaurJH9_0253
JKD6008:
SAA6008_00243 (rbsK)
JKD6159:
SAA6159_00247 (rbsK)
LGA251:
SARLGA251_02330
M013:
M013TW_0249
MRSA252:
SAR0266
MSHR1132:
SAMSHR1132_02350
MSSA476:
SAS0245
Mu3:
SAHV_0267 (rbsK)
Mu50:
SAV0268 (rbsK)
MW2:
MW0244 (rbsK)
RF122:
SAB0208c
ST398:
SAPIG0283 (rbsK)
T0131:
SAT0131_00263
TCH60:
HMPREF0772_10232 (rbsK)
TW20:
SATW20_02710
USA300_TCH1516:
USA300HOU_0280 (rbsK)
VC40:
SAVC_01085
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFI
N315 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFI
NCTC8325 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFI
Newman MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFI
USA300_FPR3757 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFI
************************************************************
COL TKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMT
N315 TKIGTDGVADFILEDFKAAHIDTSYIIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMT
NCTC8325 TKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMT
Newman TKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMT
USA300_FPR3757 TKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMT
*****************.***********:******************************
COL PEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLI
N315 PEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLI
NCTC8325 PEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLI
Newman PEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLI
USA300_FPR3757 PEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLI
************************************************************
COL DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIE
N315 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQSQHIE
NCTC8325 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIE
Newman DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIE
USA300_FPR3757 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIE
*********************************:**************************
COL AYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEE
N315 AYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEE
NCTC8325 AYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEE
Newman AYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEE
USA300_FPR3757 AYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEE
************************************************************
COL VNQV
N315 VNQV
NCTC8325 VNQV
Newman VNQV
USA300_FPR3757 VNQV
****