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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001156000
- symbol?: rbsU
- synonym:
- description?: ribose transporter RbsU
- ribose transporter RbsU
- ribose transporter, putative
- Putative ribose uptake protein RbsU, GRP transporter family
- DMT superfamily drug/metabolite transporter
- membrane protein
- Putative ribose uptake protein rbsU
- putative sugar transport protein
- ribose transporter
- sugar transport family protein
- sugar transport protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1427475..1428356
- synteny block?: BlockID0006760
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0270 (rbsU)
08BA02176:
C248_0260 (rbsU)
11819-97:
MS7_0260
6850:
RSAU_000217 (rbsU)
71193:
ST398NM01_0285
ECT-R 2:
ECTR2_231
ED133:
SAOV_0211
ED98:
SAAV_0238
HO 5096 0412:
SAEMRSA15_02300
JH1:
SaurJH1_0261
JH9:
SaurJH9_0255
JKD6008:
SAA6008_00245 (rbsU)
JKD6159:
SAA6159_00249 (rbsU)
LGA251:
SARLGA251_02350
M013:
M013TW_0251
MRSA252:
SAR0268
MSHR1132:
SAMSHR1132_02370
MSSA476:
SAS0247
Mu3:
SAHV_0269
Mu50:
SAV0270
MW2:
MW0246
RF122:
SAB0210c
ST398:
SAPIG0285
T0131:
SAT0131_00265 (plc)
TCH60:
HMPREF0772_10230 (rbsU)
TW20:
SATW20_02730
USA300_TCH1516:
USA300HOU_0282
VC40:
SAVC_01095
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIFAIILAVVTSSGFP
N315 ---MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIFAIILAVVTSSGFP
NCTC8325 ---MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIFAILLAVVTSSGFP
Newman MYNMSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIFAIILAVVTSSGFP
USA300_FPR3757 ---MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIFAIILAVVTSSGLP
**********************************************:********:*
COL TGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLGASLWGVFALGNWPGI
N315 TGTNLLFALLSGAGWGFGQIITFKAFELIGSSRAMPVTTAFQLLGASLWGVFALGNWPGI
NCTC8325 TGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLGASLWGVFALGNWPGI
Newman TGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLGASLWGVFALGNWPGI
USA300_FPR3757 TGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLGASLWGVFALGNWPGI
****************************:*******************************
COL GHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLIGEFGYWLYSAAPQATSI
N315 GHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLIGEFGYWLYSAAPQATSI
NCTC8325 GHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLIGEFGYWLYSAAPQATSI
Newman GHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLIGEFGYWLYSAAPQATSI
USA300_FPR3757 GHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLIGEFGYWLYSAAPQATSI
************************************************************
COL DGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQIISGFFFAFGALTYLISAQPN
N315 DGLTAFLPQAMGMVIVAVIYGFMNMKSENPFRNKITWLQIISGFFFAFGALTYLISAQPN
NCTC8325 DGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQIISGFFFAFGALTYLISAQPN
Newman DGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQIISGFFFAFGALTYLISAQPN
USA300_FPR3757 DGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQIISGFFFAFGALTYLISAQPN
**************************:*********************************
COL MNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITIIGLVLILVAASVTVFIK
N315 MNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITIIGLVLILVAASVTVFIK
NCTC8325 MNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITIIGLVLILVAASVTVFIK
Newman MNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITIIGLVLILVAASVTVFIK
USA300_FPR3757 MNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITIIGLVLILVAASVTVFIK
********************************************************