PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000911000
• symbol^?: sirC
• synonym:
• description^?: iron ABC transporter permease

  descriptions from strain specific annotations:

  • iron ABC transporter permease
  • iron compound ABC transporter permease SirC
  • iron compound ABC transporter, permease protein SirC
  • lipoprotein
  • lipoprotein SirC
  • siderophore compound ABC transporter permease SirC
  • staphyloferrin B ABC transporter permease subunit SirC
  • Siderophore staphylobactin ABC transporter, permease protein SirC
  • Fe3+-siderophore ABC transporter permease
  • fecCD transport family protein
  • iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein
  • iron (Fe3+) ABC transporter membrane protein
  • Iron compound ABC superfamily ATP binding cassette transporter, permease protein SirC
  • iron-dicitrate transporter subunit FecD
  • lipoprotein, SirC
  • putative siderophore transport system permease protein yfhA
  • siderophore transport protein
  • Staphylobactin transport system permease protein
  • transport system permease
• strand^?: -
• coordinates^?: 1179639..1180553
• synteny block^?: BlockID0004480
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0097 (sirC)
N315:
SA0109 (sirC)
NCTC8325:
SAOUHSC_00071
Newman:
NWMN_0057 (sirC)
USA300_FPR3757:
SAUSA300_0115 (sirC)
04-02981:
SA2981_0114 (sirC)
08BA02176:
C248_0101 (sirC)
11819-97:
MS7_0105 (yfhA)
6850:
RSAU_000067 (sirC)
71193:
ST398NM01_0124
ECT-R 2:
ECTR2_69
ED133:
SAOV_0060 (sirC)
ED98:
SAAV_0081 (sirC)
HO 5096 0412:
SAEMRSA15_00790 (sirC)
JH1:
SaurJH1_0104
JH9:
SaurJH9_0100
JKD6008:
SAA6008_00091 (fecD)
JKD6159:
SAA6159_00096 (fepD)
LGA251:
SARLGA251_00880 (sirC)
M013:
M013TW_0103
MRSA252:
SAR0116 (sirC)
MSHR1132:
SAMSHR1132_00890
MSSA476:
SAS0087
Mu3:
SAHV_0112 (sirC)
Mu50:
SAV0113 (sirC)
MW2:
MW0086 (sirC)
RF122:
SAB0052c (sirC)
ST398:
SAPIG0124
T0131:
SAT0131_00098
TCH60:
HMPREF0772_10384 (sirC)
TW20:
SATW20_01250 (sirC)
USA300_TCH1516:
USA300HOU_0124 (sirC)
VC40:
SAVC_00305

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTEKINKKDNYHLIFALIFLAIVSVVSMMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLR
  N315            ---------------------------MMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLR
  NCTC8325        ----------------------------MIGSSFIPLQRVLMYFINPNDSMDQFTLEVLR
  Newman          MTEKINKKDNYHLIFALIFLAIVSVVSMMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLR
  USA300_FPR3757  MTEKINKKDNYHLIFALIFLAIVSVVSMMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLR
                                              ********************************
  
  COL             LPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLL
  N315            LPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLL
  NCTC8325        LPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLL
  Newman          LPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLL
  USA300_FPR3757  LPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLL
                  ************************************************************
  
  COL             PLFAVLGGAVAMMILLVFQTKGQIRPTTLIIIGISMQTLFIALVQGLLITTKQLSAAKAY
  N315            PLFAVLGGAVAMMILLVFQTKGQIRPTILIIIGISMQTLFIALVQGLLITTKQLSAAKAY
  NCTC8325        PLFAVLGGAVAMMILLVFQTKGQIRPTTLIIIGISMQTLFIALVQGLLITTKQLSAAKAY
  Newman          PLFAVLGGAVAMMILLVFQTKGQIRPTTLIIIGISMQTLFIALVQGLLITTKQLSAAKAY
  USA300_FPR3757  PLFAVLGGAVAMMILLVFQTKGQIRPTTLIIIGISMQTLFIALVQGLLITTKQLSAAKAY
                  *************************** ********************************
  
  COL             TWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLGLHVQRMKLIQ
  N315            TWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLGLHVQRMKLIQ
  NCTC8325        TWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLGLHVQRMKLIQ
  Newman          TWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLGLHVQRMKLIQ
  USA300_FPR3757  TWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLGLHVQRMKLIQ
                  ************************************************************
  
  COL             LITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGR
  N315            LITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGR
  NCTC8325        LITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGR
  Newman          LITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGR
  USA300_FPR3757  LITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGR
                  ************************************************************
  
  COL             TLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL
  N315            TLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL
  NCTC8325        TLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL
  Newman          TLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL
  USA300_FPR3757  TLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL
                  ********************************