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NCBI: 10-JUN-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL1657 [new locus tag: SACOL_RS08455 ]
  • pan locus tag?: SAUPAN004191000
  • symbol: SACOL1657
  • pan gene symbol?: —
  • synonym: sel26
  • product: enterotoxin type A

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL1657 [new locus tag: SACOL_RS08455 ]
  • symbol: SACOL1657
  • product: enterotoxin type A
  • replicon: chromosome
  • strand: -
  • coordinates: 1685330..1686034
  • length: 705
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    TTGTTAGAAGGAATTTTTACAAATTCAGCGAGTGCAATCGAATATTCAGACTTACATCAT
    AAAAGTAAGTTTGATTCAAAGCGTCTAAGTAATGCTAAGATGTCATTCATCAATCCAACT
    CAGCTTGAAAATAAAAACACAAACGATAGACTGTTGAAGCATGATTTGTTATTTCATGAC
    ATGTTCGTAAATGATGATTGGAAAAAGGATTTTAAAGTTGAATTTGAAAATGAGGCACTT
    TCAAAGAAATTTATAAATAAGGATATCGATATATTTGCTGGAAATTATGGATACGGATGT
    CATGGGGGAGCAACCAATAAAACGCAATGTAGTTATGGTGGTGTTACTTTAAGTGACAAT
    AATAAATACGATGATTATAAGAATATACCTTGTAATTTATGGATTGACGGACATCAAACA
    GAAATAGAACTAACTGCAGTAAAAACGAAAAAGAAAATTGTTACTATTCAAGAATTAGAG
    GTTCAATTAAGAAATTATTTGAATGAGAAGTATAAGTTGTACGAACAAGGTGGCGACATT
    GTTAAAGGGTATGTTAAATATTATAATGATGATGAACAAAATGTAGAATATGATTTTTAT
    AATTTAAATGGTGAGTATGGTCGTGAGGTATTAAAAATGTATGCTGATAATAAAACTATC
    AATAGTGACAAATTGCATTTAGATATCTATTTATTCAAATCATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    705


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL1657 [new locus tag: SACOL_RS08455 ]
  • symbol: SACOL1657
  • description: enterotoxin type A
  • length: 234
  • theoretical pI: 5.91259
  • theoretical MW: 27337.4
  • GRAVY: -0.791026

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • enterotoxin family protein
  • PFAM:
    OB_enterotoxin (CL0658) Stap_Strp_toxin; Staphylococcal/Streptococcal toxin, OB-fold domain (PF01123; HMM-score: 110.1)
    Ubiquitin (CL0072) Stap_Strp_tox_C; Staphylococcal/Streptococcal toxin, beta-grasp domain (PF02876; HMM-score: 89.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Extracellular
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0
    • Extracellular Score: 10
    • Internal Helices: 0
  • DeepLocPro: Extracellular
    • Cytoplasmic Score: 0.211
    • Cytoplasmic Membrane Score: 0.0011
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.7878
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.002761
    • TAT(Tat/SPI): 0.000376
    • LIPO(Sec/SPII): 0.000412
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MLEGIFTNSASAIEYSDLHHKSKFDSKRLSNAKMSFINPTQLENKNTNDRLLKHDLLFHDMFVNDDWKKDFKVEFENEALSKKFINKDIDIFAGNYGYGCHGGATNKTQCSYGGVTLSDNNKYDDYKNIPCNLWIDGHQTEIELTAVKTKKKIVTIQELEVQLRNYLNEKYKLYEQGGDIVKGYVKYYNDDEQNVEYDFYNLNGEYGREVLKMYADNKTINSDKLHLDIYLFKS

⊟Experimental data[edit | edit source]

  • experimentally validated: PeptideAtlas
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]


⊟Relevant publications[edit | edit source]

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