Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS12715 [old locus tag: NWMN_2203 ]
- pan locus tag?: SAUPAN005772000
- symbol: NWMN_RS12715
- pan gene symbol?: —
- synonym:
- product: CHAP domain-containing protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS12715 [old locus tag: NWMN_2203 ]
- symbol: NWMN_RS12715
- product: CHAP domain-containing protein
- replicon: chromosome
- strand: +
- coordinates: 2424433..2424933
- length: 501
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481ATGAAAAAATTAGTAACAGCAACTACGTTAACAGCAGGAATCGGCACAGCATTAGTAGGT
CAAGCACATCATGCAGATGCTGCTGAAAATTATACAAATTACAACAACTATAACTACAAC
ACGACTCAAACTACAACGACTACGACAACTACGACAACTACATCATCAATTTCACATTCT
GGTAACTTATACACTGCAGGACAATGTACTTGGTATGTATATGATAAAGTTGGCGGAGAA
ATCGGTTCTACTTGGGGAAATGCTAATAATTGGGCTGCTGCTGCACAAGGTGCTGGATTC
ACAGTAAATCATACACCTTCTAAAGGCGCTATCCTACAATCTTCTGAAGGACCATTTGGT
CACGTTGCATATGTAGAAAGTGTAAACAGTGATGGTTCAGTTACAATTTCAGAAATGAAT
TATAGTGGCGGACCTTTCTCAGTAAGTTCTAGAACTATTTCTGCAAGTGAAGCAGGTAAC
TACAACTACATCCATATTTAA60
120
180
240
300
360
420
480
501
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS12715 [old locus tag: NWMN_2203 ]
- symbol: NWMN_RS12715
- description: CHAP domain-containing protein
- length: 166
- theoretical pI: 6.21564
- theoretical MW: 17398.7
- GRAVY: -0.351205
⊟Function[edit | edit source]
- TIGRFAM: Cell envelope Surface structures pilus (MSHA type) biogenesis protein MshL (TIGR02519; HMM-score: 5.4)
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: Peptidase_CA (CL0125) CHAP; CHAP domain (PF05257; HMM-score: 53.4)and 1 moreno clan defined Dicty_REP; Dictyostelium (Slime Mold) REP protein (PF05086; HMM-score: 4.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.02
- Extracellular Score: 9.98
- Internal Helices: 0
- LocateP:
- SignalP: Signal peptide SP(Sec/SPI) length 27 aa
- SP(Sec/SPI): 0.996663
- TAT(Tat/SPI): 0.001506
- LIPO(Sec/SPII): 0.001376
- Cleavage Site: CS pos: 27-28. ADA-AE. Pr: 0.9730
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for NCTC8325
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.