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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS12050 [old locus tag: NWMN_2080 ]
- pan locus tag?: SAUPAN005570000
- symbol: NWMN_RS12050
- pan gene symbol?: sfnaB
- synonym:
- product: IucA/IucC family siderophore biosynthesis protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS12050 [old locus tag: NWMN_2080 ]
- symbol: NWMN_RS12050
- product: IucA/IucC family siderophore biosynthesis protein
- replicon: chromosome
- strand: -
- coordinates: 2316697..2318454
- length: 1758
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1741ATGGTATATCTTGAATGGGCAAAGGCAGATAGAAATATTCAATATCGTGTAATTAACGCC
ATTATTAAAGAACGTATTTACCCCGAGCAAACATTTATTTCGCAAAAAGGATCTTTAATT
GAAATTCAGTATCATATGCATGTGTTGACTATTGAAGTTGTTAGAAAAAGTGCATTAGAA
CGCTATGAGTTTACAGGTGATATTACTTATTTAAATAAAGGTGAAACGTCATTAATTATA
ACTTTAGAAGGTTTATTAGATGTGTTGAATCATGACTTTGATATCCCTATTTCAGAGCGA
CTACGCGAAGAGTTAATACACAGTCGAGATAGTTTAGTTGAAACATATAAGCAAATGTCT
CACAGACAAACGTTAATAAGTCAAAGTTTTAAATTTTCAAGGTTACCACAAGATATTAAC
TTTTTTTCATGGTTACAACATGTAAAAGATAGTGATAAGACAGATGATTTAACTTATTCT
GAGAGTTTGGTACCAGAGGGGCATCCAACACACCCTTTAACCAAAACGAAATTGCCCTTA
ACTATGGAAGAAGTACGAGCATATGCACCTGAGTTTGAAAAAGAAATCCCTTTGCAAATT
ATGATGATTGAAAAAGACCATGTTGTGTGCACAGCTATGGATGGTAATGATCAATTTATT
ATTGATGAAATAATTCCCGAATACTACAATCAGATTCGTGTGTTTTTAAAGAGTTTAGGT
TTGAAAAGTGAAGACTATAGAGCGATTTTAGTACATCCTTGGCAATATGATCATACGATA
GGGAAATATTTTGAAGCATGGATTGCTAAAAAAATATTAATTCCAACGCCGTTTACAATA
CTTTCAAAAGCAACTTTATCATTTAGGACGATGTCTTTAATTGATAAACCATACCATGTT
AAGTTGCCCGTCGATGCACAAGCAACAAGTGCCGTTAGAACAGTCTCAACTGTGACTACT
GTAGATGGACCAAAGTTAAGTTATGCTTTACAAAACATGTTGAATCAATATCCAGGATTT
AAAGTTGCTATGGAACCGTTCGGTGAATATGCAAATGTTGATAAAGATAGGGCACGTCAG
CTTGCTTGTATTATAAGACAAAAGCCTGAAATTGATGGAAAAGGTGCAACAGTAGTTAGT
GCAAGTCTAGTTAATAAAAATCCAATAGATCAAAAAGTTATCGTGGATAGTTACTTAGAG
TGGTTAAATCAAGGAATTACTAAAGAAAGTATTACGACATTTATTGAACGATACGCTCAA
GCATTAATCCCGCCTTTAATTGCTTTTATTCAAAATTATGGAATTGCTTTAGAAGCACAC
ATGCAAAATACAGTAGTGAACTTGGGGCCACATTTTGACATTCAATTTTTAGTGAGAGAT
TTAGGTGGTTCTAGAATTGATTTAGAAACATTACAACATCGTGTATCAGATATTAAAATT
ACAAATGATAGTTTAATAGCTGATTCTATAGATGCAGTGATTGCAAAATTCCAACATGCT
GTTATTCAAAATCAAATGGCAGAATTAATCCATCATTTTAATCAGTATGATTGTGTTGAA
GAAACCGAATTATTTAACATAGTACAGCAAGTAGTAGCGCATGCCATTAACCCAACACTA
CCACATGCAAATGAGTTAAAAGATATTTTGTTTGGACCAACAATTACTGTCAAAGCGTTG
TTAAATATGAGAATGGAAAATAAAGTAAAGCAATATTTAAATATTGAGTTAGATAATCCG
ATAAAAAAAGAGGTGTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS12050 [old locus tag: NWMN_2080 ]
- symbol: NWMN_RS12050
- description: IucA/IucC family siderophore biosynthesis protein
- length: 585
- theoretical pI: 5.99704
- theoretical MW: 67210.8
- GRAVY: -0.184957
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: PKinase (CL0016) IucA_IucC; IucA / IucC family (PF04183; HMM-score: 174.9)and 1 moreno clan defined FhuF; Ferric iron reductase FhuF-like transporter (PF06276; HMM-score: 96.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001013
- TAT(Tat/SPI): 0.000096
- LIPO(Sec/SPII): 0.000314
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MVYLEWAKADRNIQYRVINAIIKERIYPEQTFISQKGSLIEIQYHMHVLTIEVVRKSALERYEFTGDITYLNKGETSLIITLEGLLDVLNHDFDIPISERLREELIHSRDSLVETYKQMSHRQTLISQSFKFSRLPQDINFFSWLQHVKDSDKTDDLTYSESLVPEGHPTHPLTKTKLPLTMEEVRAYAPEFEKEIPLQIMMIEKDHVVCTAMDGNDQFIIDEIIPEYYNQIRVFLKSLGLKSEDYRAILVHPWQYDHTIGKYFEAWIAKKILIPTPFTILSKATLSFRTMSLIDKPYHVKLPVDAQATSAVRTVSTVTTVDGPKLSYALQNMLNQYPGFKVAMEPFGEYANVDKDRARQLACIIRQKPEIDGKGATVVSASLVNKNPIDQKVIVDSYLEWLNQGITKESITTFIERYAQALIPPLIAFIQNYGIALEAHMQNTVVNLGPHFDIQFLVRDLGGSRIDLETLQHRVSDIKITNDSLIADSIDAVIAKFQHAVIQNQMAELIHHFNQYDCVEETELFNIVQQVVAHAINPTLPHANELKDILFGPTITVKALLNMRMENKVKQYLNIELDNPIKKEV
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: Fur*, SigB see NWMN_2080
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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