PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 06-JUL-2013

⊟Summary

• organism: Staphylococcus aureus Newman
• locus tag: NWMN_1031 [new locus tag: NWMN_RS05835 ]
• pan locus tag^?: SAUPAN001698000
• symbol: NWMN_1031
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: NWMN_1031 [new locus tag: NWMN_RS05835 ]
• symbol: NWMN_1031
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 1131180..1133090
• length: 1911
• essential: unknown

⊟Accession numbers

• Gene ID: 5330635 NCBI
• RefSeq: YP_001332065 NCBI
• BioCyc:
• MicrobesOnline: 3706582 MicrobesOnline

⊟Phenotype

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⊟DNA sequence

• 1
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  841
  901
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  1021
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  1141
  1201
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  1321
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  1501
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  1621
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  1861
  
  ATGAGTAATAAACTAATTACAGATTTAAGTAGAGTCTTTGACTACAGATATGTAGATGAA
  AATGAGTATAACTTTAAACTTATTTCAGACATGCTGTCGGATTTTAATTTCTCTCTTGAA
  TACCACAGAAATAAAGAGGGATTCGCACATGATGGAGAACAAATAAAGTATGAACATTTA
  AATGTTACAAGTAGCGTCTCTGACTTTTTAACATATTTAAACGGTCGATTTAGCAACATG
  GTACTAGGTCATAACGGCGACGGTATCAACGAAGTAAAAGACGCGCGCGTTGATAATACA
  GGTTATGGTCATAAGACATTGCAAGATCGTTTGTATCATGATTATTCAACACTAGATGCT
  TTCACTAAAAAGGTTGAGAAAGCTGTAGATGAACACTATAAAGAATATCGAGCGACAGAA
  TACCGATTCGAACCAAAAGAGCAAGAACCGGAATTTATCACTGATTTATCGCCATATACA
  AATGCAGTAATGCAATCATTTTGGGTAGACCCTAGAACGAAAATTATTTATATGACGCAA
  GCTCGTCCAGGTAATCATTACATGTTATCTAGATTGAAGCCCAACGGACAATTTATTGAT
  AGATTGCTTGTTAAAAACGGCGGTCACGGTACACACAATGCGTATAGATACATTGATGGA
  GAATTATGGATTTATTCAGCTGTATTGGACAGTAACAAAAACAACAAGTTTGTACGTTTC
  CAATATAGAACTGGAGAAATAACTTATGGTAATGAAATGCAAGATGTCATGCCGAATATA
  TTTAACGACAGATATACGTCAGCGATTTATAATCCAGTAGAAAATTTAATGATTTTTAGA
  CGTGAATATAAACCCACTGAAAGACAACTTAAGAATTCGTTGAACTTTGTTGAGGTTAGA
  AGTGCTGACGATATTGATAAAGGTATAGACAAAGTATTGTATCAAATGGATATACCTATG
  GAATACACTTCAGATACACAACCTATGCAAGGTATCACTTATGATGCAGGTATCTTATAT
  TGGTATACAGGTGATTCGAATACAGCCAACCCTAACTACTTACAAGGCTTCGATATCAAA
  ACGAAAGAATTGTTATTTAAACGTCGTATCGATATAGGCGGTGTGAATAACAACTTTAAA
  GGAGATTTCCAAGAGGCTGAGGGTCTAGATATGTATTACGATCTAGAAACAGGACGTAAA
  GCACTTCTAATCGGGGTAACTATTGGACCTGGTAACAACAGACATCATTCAATTTATTCT
  ATCGGTCAAAGAGGTGTAAACCAATTCTTGAAAAACATCGCACCTCAAGTATCAATGACT
  GATTCAGGCGGACGTGTTAAACCGTTACCAATACAGAACCCAGCATATCTAAGTGATATT
  ACGGAAGTTGGTCATTACTATATCTATACGCAAGACACACAAAATGCATTAGATTTCCCG
  TTACCGAAAGCGTTTAGAGATGCAGGGTGGTTCTTGGATGTACTGCCTGGACACTATAAT
  GGTGCTCTAAGACAAGTACTTACCAGAAACAGCACAGGTAGAAATATGCTTAAATTCGAA
  CGTGTCATTGACATTTTCAATAAGAAAAACAACGGAGCATGGAATTTCTGCCCGCAAAAC
  GCCGGTTATTGGGAACATATCCCTAAGAGTATTACAAAATTATCAGATTTAAAAATCGTT
  GGTTTAGATTTCTATATCACTACTGAAGAATCAAAACGATTTACTGATTTTCCTAAAGAC
  CTTAAAGGTATTGCAGGTTGGATATTAGAAGTAAAATCGAATACACCAGGTAACACAACA
  CAAGTATTAAGACGTAATAACTTCCCGTCTGCACATCAATTTTTAGTTAGAAACTTTGGT
  ACTGGTGGCGTTGGTAAATGGAGTTTATTCGAGGGAAAGGTGGTTGAATAA
  60
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  1860
  1911
  

⊟Protein

⊟General

• locus tag: NWMN_1031 [new locus tag: NWMN_RS05835 ]
• symbol: NWMN_1031
• description: hypothetical protein
• length: 636
• theoretical pI: 6.84847
• theoretical MW: 73518
• GRAVY: -0.627987

⊟Function

• TIGRFAM:
• TheSEED:
• PFAM:

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• LocateP: Intracellular
  • Prediction by SwissProt Classification: Cytoplasmic
  • Pathway Prediction: No pathway
  • Intracellular possibility: 1
  • Signal peptide possibility: -1
  • N-terminally Anchored Score: 1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.003079
  • TAT(Tat/SPI): 0.000127
  • LIPO(Sec/SPII): 0.00028
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 151221243 NCBI
• RefSeq: YP_001332065 NCBI
• UniProt: A0A0H3K839 UniProt

⊟Protein sequence

• MSNKLITDLSRVFDYRYVDENEYNFKLISDMLSDFNFSLEYHRNKEGFAHDGEQIKYEHLNVTSSVSDFLTYLNGRFSNMVLGHNGDGINEVKDARVDNTGYGHKTLQDRLYHDYSTLDAFTKKVEKAVDEHYKEYRATEYRFEPKEQEPEFITDLSPYTNAVMQSFWVDPRTKIIYMTQARPGNHYMLSRLKPNGQFIDRLLVKNGGHGTHNAYRYIDGELWIYSAVLDSNKNNKFVRFQYRTGEITYGNEMQDVMPNIFNDRYTSAIYNPVENLMIFRREYKPTERQLKNSLNFVEVRSADDIDKGIDKVLYQMDIPMEYTSDTQPMQGITYDAGILYWYTGDSNTANPNYLQGFDIKTKELLFKRRIDIGGVNNNFKGDFQEAEGLDMYYDLETGRKALLIGVTIGPGNNRHHSIYSIGQRGVNQFLKNIAPQVSMTDSGGRVKPLPIQNPAYLSDITEVGHYYIYTQDTQNALDFPLPKAFRDAGWFLDVLPGHYNGALRQVLTRNSTGRNMLKFERVIDIFNKKNNGAWNFCPQNAGYWEHIPKSITKLSDLKIVGLDFYITTEESKRFTDFPKDLKGIAGWILEVKSNTPGNTTQVLRRNNFPSAHQFLVRNFGTGGVGKWSLFEGKVVE

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: NWMN_1018 > NWMN_1019 > NWMN_1020 > NWMN_1021 > NWMN_1022 > NWMN_1023 > NWMN_1024 > NWMN_1025 > NWMN_1026 > NWMN_1027 > NWMN_1028 > NWMN_1029 > NWMN_1030 > NWMN_1031 > NWMN_1032 > NWMN_1033

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications