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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_1641 [new locus tag: NWMN_RS09215 ]
- pan locus tag?: SAUPAN004425000
- symbol: trmB
- pan gene symbol?: trmB
- synonym:
- product: tRNA (guanine-N(7)-)-methyltransferase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_1641 [new locus tag: NWMN_RS09215 ]
- symbol: trmB
- product: tRNA (guanine-N(7)-)-methyltransferase
- replicon: chromosome
- strand: -
- coordinates: 1828673..1829317
- length: 645
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5330965 NCBI
- RefSeq: YP_001332675 NCBI
- BioCyc:
- MicrobesOnline: 3707193 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGAGAGTTCGATACAAACCATGGGCTAAAGATTATTTAAAAGATCATCCTGAATTGGTT
GACATGGACGGTCAACATGCAGGGAAAATGACTGAATGGTTTGATAAAACGCAACCGATA
CACATTGAAATTGGTTCGGGTATGGGGCAGTTTATTACAACATTAGCTGCTCAAAATCCT
CATATTAACTATATTTCAATGGAACGTGAGAAAAGTATCGTTTATAAAGTATTGGATAAA
GTTAAAGAGATGGGTTTAACAAATTTAAAGATTATTTGTAATGACGCCATTGAATTAAAT
GAATATTTTAAAGACGGCGAAGTTTCGCGTATTTATTTGAACTTTTCAGATCCATGGCCA
AAAAATCGTCATGCAAAACGACGTTTAACGTATCATACGTTTTTAGCGTTGTATCAACAA
ATCTTAAATGATGAAGGAGATTTACATTTTAAAACTGATAACAGAGGACTATTTGCCTAC
AGTTTAGAAAGTATGTCTCAATTTGGAATGTATTTTACAAAAATAAATCTAAATTTACAT
CAAGAAGACGATGGCAGTAATATTTTAACAGAATATGAAAAGAAATTTTCGGATAAAGGG
TCACGTATTTATCGTATGGAAGCGAAATTCCATTCACAAAAATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_1641 [new locus tag: NWMN_RS09215 ]
- symbol: TrmB
- description: tRNA (guanine-N(7)-)-methyltransferase
- length: 214
- theoretical pI: 7.82983
- theoretical MW: 25274.6
- GRAVY: -0.709813
⊟Function[edit | edit source]
- ⊞reaction: EC 2.1.1.33? ExPASy
- ⊞TIGRFAM: Protein synthesis tRNA and rRNA base modification tRNA (guanine-N(7)-)-methyltransferase (TIGR00091; EC 2.1.1.33; HMM-score: 184.4)and 4 more
- TheSEED :
- tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)
- ⊞PFAM: NADP_Rossmann (CL0063) Methyltransf_4; Putative methyltransferase (PF02390; HMM-score: 169.9)and 10 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MRVRYKPWAKDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEIGSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAYSLESMSQFGMYFTKINLNLHQEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available