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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004425000
- symbol?: trmB
- synonym:
- description?: tRNA (guanine-N(7)-)-methyltransferase
- tRNA (guanine-N(7)-)-methyltransferase
- tRNA (guanosine(46)-N7)-methyltransferase TrmB
- putative methyltransferase
- tRNA (guanine46-N7-)-methyltransferase
- tRNA (guanine-N(7)-)-methyltransferase, TrmB
- tRNA (m(7)G46) methyltransferase
- tRNA guanine methyltransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4672502..4673146
- synteny block?: BlockID0034230
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1706
08BA02176:
C248_1794
11819-97:
MS7_1754 (trmB)
6850:
RSAU_001605 (trmB)
71193:
ST398NM01_1801
ECT-R 2:
ECTR2_1588 (trmB)
ED133:
SAOV_1734
ED98:
SAAV_1758 (trmB)
HO 5096 0412:
SAEMRSA15_16560
JH1:
SaurJH1_1838 (trmB)
JH9:
SaurJH9_1803 (trmB)
JKD6008:
SAA6008_01720 (trmB)
JKD6159:
SAA6159_01671 (trmB)
LGA251:
SARLGA251_16380
M013:
M013TW_1763
MRSA252:
SAR1833 (trmB)
MSHR1132:
SAMSHR1132_15980
MSSA476:
SAS1674 (trmB)
Mu3:
SAHV_1734 (trmB)
Mu50:
SAV1748 (trmB)
MW2:
MW1691 (trmB)
RF122:
SAB1608c (trmB)
ST398:
SAPIG1801 (trmB)
T0131:
SAT0131_01857
TCH60:
HMPREF0772_11404 (trmB)
TW20:
SATW20_17380
USA300_TCH1516:
USA300HOU_1738 (trmB)
VC40:
SAVC_07950 (trmB)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRVRYKPWAKDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEIGSGMGQFITTLAAQNP
N315 MRVRYKPWAEDYLKDHPELVDMEGQHAGEMTEWFDKTQPIHIEIGSGMGQFITTLAAQNP
NCTC8325 MRVRYKPWAEDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEIGSGMGQFITTLAAQNP
Newman MRVRYKPWAKDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEIGSGMGQFITTLAAQNP
USA300_FPR3757 MRVRYKPWAEDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEIGSGMGQFITTLAAQNP
*********:************:*****:*******************************
COL HINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWP
N315 HINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWP
NCTC8325 HINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWP
Newman HINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWP
USA300_FPR3757 HINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEYFKDGEVSRIYLNFSDPWP
************************************************************
COL KNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAYSLESMSQFGMYFTKINLNLH
N315 KNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAYSLESMSQFGMYFTKINLNLH
NCTC8325 KNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAYSLESMSQFGMYFTKINLNLH
Newman KNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAYSLESMSQFGMYFTKINLNLH
USA300_FPR3757 KNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAYSLESMSQFGMYFTKINLNLH
************************************************************
COL QEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK
N315 QEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK
NCTC8325 QEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK
Newman QEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK
USA300_FPR3757 QEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK
**********************************