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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005690000
- symbol?: rplE
- synonym:
- description?: 50S ribosomal protein L5
- 50S ribosomal protein L5
- 50S ribosomal protein L5 (BL6)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5804932..5805423
- synteny block?: BlockID0044360
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2176 (rplE)
08BA02176:
C248_2274 (rplE)
11819-97:
MS7_2258 (rplE)
6850:
RSAU_002074 (rplE)
71193:
ST398NM01_2291
ECT-R 2:
ECTR2_2100
ED133:
SAOV_2275c
ED98:
SAAV_2300 (rplE)
HO 5096 0412:
SAEMRSA15_21370 (rplE)
JH1:
SaurJH1_2306 (rplE)
JH9:
SaurJH9_2265 (rplE)
JKD6008:
SAA6008_02275 (rplE)
JKD6159:
SAA6159_02145 (rplE)
LGA251:
SARLGA251_20240 (rplE)
M013:
M013TW_2197
MRSA252:
SAR2323 (rplE)
MSHR1132:
SAMSHR1132_20640
MSSA476:
SAS2129 (rplE)
Mu3:
SAHV_2222 (rplE)
Mu50:
SAV2238 (rplE)
MW2:
MW2157 (rplE)
RF122:
SAB2110c (rplE)
ST398:
SAPIG2291
T0131:
SAT0131_02411 (pdhD)
TCH60:
HMPREF0772_10960 (rplE)
TW20:
SATW20_23720 (rplE)
USA300_TCH1516:
USA300HOU_2229 (rplE)
VC40:
SAVC_10060 (rplE)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAVEELELI
N315 MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAVEELELI
NCTC8325 MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAVEELELI
Newman MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAVEELELI
USA300_FPR3757 MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAVEELELI
************************************************************
COL TGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFQGVSKK
N315 TGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFQGVSKK
NCTC8325 TGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFQGVSKK
Newman TGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFQGVSKK
USA300_FPR3757 TGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFQGVSKK
************************************************************
COL AFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLANFGMPFRK
N315 AFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLANFGMPFRK
NCTC8325 AFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLANFGMPFRK
Newman AFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLANFGMPFRK
USA300_FPR3757 AFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLANFGMPFRK
***********************************************************