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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005580000
- symbol?: amaP
- synonym:
- description?: alkaline shock response membrane anchor protein AmaP
- strand?: -
- coordinates?: 5719081..5719551
- synteny block?: BlockID0043400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2122
08BA02176:
C248_2222
11819-97:
MS7_2207
6850:
RSAU_002028
71193:
ST398NM01_2244
ECT-R 2:
ECTR2_2045
ED133:
SAOV_2231c
ED98:
SAAV_2245
HO 5096 0412:
SAEMRSA15_20890
JH1:
SaurJH1_2254
JH9:
SaurJH9_2215
JKD6008:
SAA6008_02225
JKD6159:
SAA6159_02095
LGA251:
SARLGA251_19790
M013:
M013TW_2150
MRSA252:
SAR2275
MSHR1132:
SAMSHR1132_20160
MSSA476:
SAS2085
Mu3:
SAHV_2168
Mu50:
SAV2184
MW2:
MW2110
RF122:
SAB2065c
ST398:
SAPIG2244
T0131:
SAT0131_02357 (sspB)
TCH60:
HMPREF0772_11007
TW20:
SATW20_23220
USA300_TCH1516:
USA300HOU_2177
VC40:
SAVC_09810
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSLGVKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQPLLISLAALLIL
N315 ----MKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQPLLISLAALLIL
NCTC8325 ----MKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQPLLISLAALLIL
Newman MSLGVKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQPLLISLAALLIL
USA300_FPR3757 MSLGVKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQPLLISLAALLIL
:*******************************************************
COL IGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKYDQVRQPNVVAKLYN
N315 IGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKYDQVRQPNVVAKLYN
NCTC8325 IGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKYDQVRQPNVVAKLYN
Newman IGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKYDQVRQPNVVAKLYN
USA300_FPR3757 IGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKYDQVRQPNVVAKLYN
************************************************************
COL KKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPVRKLEVNVRDQKTSGPR
N315 KKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPVRKLEVNVRDQKTSGPR
NCTC8325 KKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPVRKLEVNVRDQKTSGPR
Newman KKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPVRKLEVNVRDQKTSGPR
USA300_FPR3757 KKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPVRKLEVNVRDQKTSGPR
************************************************************
COL VL
N315 VL
NCTC8325 VL
Newman VL
USA300_FPR3757 VL
**