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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005436000
- symbol?: dps
- synonym:
- description?: DNA starvation/stationary phase protection protein
- DNA starvation/stationary phase protection protein
- general stress protein 20U
- Dps family protein
- general stress protein 20U, putative
- DNA protection during starvation protein 1
- DNA protection during starvation protein 2
- Dps family stress protein
- Ferritin, Dps family protein
- ferritin Dps family protein
- metalloregulation DNA-binding stress protein
- non-heme iron-containing ferritin
- Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase
- putative non-heme iron-containing ferritin
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5594823..5595266
- synteny block?: BlockID0042310
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2079 (dps)
08BA02176:
C248_2155
11819-97:
MS7_2157 (dps1)
6850:
RSAU_001977 (dps)
71193:
ST398NM01_2181
ECT-R 2:
ECTR2_1995
ED133:
SAOV_2179c
ED98:
SAAV_2194
HO 5096 0412:
SAEMRSA15_20470
JH1:
SaurJH1_2213
JH9:
SaurJH9_2175
JKD6008:
SAA6008_02178 (dps)
JKD6159:
SAA6159_02053 (dps)
LGA251:
SARLGA251_19400
M013:
M013TW_2099
MRSA252:
SAR2227
MSHR1132:
SAMSHR1132_19620
MSSA476:
SAS2042
Mu3:
SAHV_2123 (dps)
Mu50:
SAV2139 (dps)
MW2:
MW2063 (dps)
RF122:
SAB2023c
ST398:
SAPIG2181
T0131:
SAT0131_02304
TCH60:
HMPREF0772_11051 (dps)
TW20:
SATW20_22770
USA300_TCH1516:
USA300HOU_2128 (dps)
VC40:
SAVC_09570
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAE
N315 MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAE
NCTC8325 MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAE
Newman MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAE
USA300_FPR3757 MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAE
************************************************************
COL RILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAG
N315 RILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAG
NCTC8325 RILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAG
Newman RILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAG
USA300_FPR3757 RILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAG
************************************************************
COL DDVSEDMFIGMQTSVDKHNWMFKSYLS
N315 DDVSEDMFIGMQTSVDKHNWMFKSYLS
NCTC8325 DDVSEDMFIGMQTSVDKHNWMFKSYLS
Newman DDVSEDMFIGMQTSVDKHNWMFKSYLS
USA300_FPR3757 DDVSEDMFIGMQTSVDKHNWMFKSYLS
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