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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005306000
- symbol?: ilvC
- synonym:
- description?: ketol-acid reductoisomerase
- ketol-acid reductoisomerase
- 2-dehydropantoate 2-reductase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5467671..5468690
- synteny block?: BlockID0041060
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1997 (ilvC)
08BA02176:
C248_2062 (ilvC)
11819-97:
MS7_2068 (ilvC)
6850:
RSAU_001889 (ilvC)
71193:
ST398NM01_2095
ECT-R 2:
ECTR2_1907 (ilvC)
ED133:
SAOV_2093 (ilvC)
ED98:
SAAV_2104 (ilvC)
HO 5096 0412:
SAEMRSA15_19640 (ilvC)
JH1:
SaurJH1_2130
JH9:
SaurJH9_2093
JKD6008:
SAA6008_02094 (ilvC)
JKD6159:
SAA6159_01969 (ilvC)
LGA251:
SARLGA251_18590 (ilvC)
M013:
M013TW_2009
MRSA252:
SAR2143 (ilvC)
MSHR1132:
SAMSHR1132_18780
MSSA476:
SAS1961
Mu3:
SAHV_2041 (ilvC)
Mu50:
SAV2056 (ilvC)
MW2:
MW1980 (ilvC)
RF122:
SAB1941 (ilvC)
ST398:
SAPIG2095 (ilvC)
T0131:
SAT0131_02209
TCH60:
HMPREF0772_11142 (ilvC)
TW20:
SATW20_21960 (ilvC)
USA300_TCH1516:
USA300HOU_2051 (ilvC)
VC40:
SAVC_09160
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVVIGIRPGRSFDKAKEDG
N315 MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVVIGIRPGRSFDKAKEDG
NCTC8325 MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVVIGIRPGRSFDKAKEDG
Newman MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVVIGIRPGRSFDKAKEDG
USA300_FPR3757 MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVVIGIRPGRSFDKAKEDG
************************************************************
COL FDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGVIQPPA
N315 FDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGVIQPPA
NCTC8325 FDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGVIQPPA
Newman FDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGVIQPPA
USA300_FPR3757 FDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGVIQPPA
************************************************************
COL DVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQGASGQARNIALSYAKGIGATRAGVIE
N315 DVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQDASGQARNIALSYAKGIGATRAGVIE
NCTC8325 DVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQGASGQARNIALSYAKGIGATRAGVIE
Newman DVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQGASGQARNIALSYAKGIGATRAGVIE
USA300_FPR3757 DVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQGASGQARNIALSYAKGIGATRAGVIE
**********************************.*************************
COL TTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYE
N315 TTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYE
NCTC8325 TTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYE
Newman TTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYE
USA300_FPR3757 TTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYE
************************************************************
COL GGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKE
N315 GGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKE
NCTC8325 GGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKE
Newman GGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKE
USA300_FPR3757 GGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKE
************************************************************
COL FYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
N315 FYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
NCTC8325 FYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
Newman FYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
USA300_FPR3757 FYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
**********************************