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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005131000
- symbol?: —
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- helix-turn-helix domain-containing protein
- phage transcriptional regulator
- putative phage transcriptional regulator
- DNA-binding protein, phage associated
- helix-turn-helix family protein
- phage DNA-binding protein
- Phage transcriptional regulator, Cro/CI family
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5266538..5266801
- synteny block?: BlockID0039830
- occurrence?: in 30% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1958
08BA02176:
—
11819-97:
—
6850:
—
71193:
ST398NM01_2957
ECT-R 2:
ECTR2_1867
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR2099
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
SATW20_19940
USA300_TCH1516:
USA300HOU_2003
VC40:
—
⊟Genome Viewer[edit | edit source]
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 ------------------------------------------------------------
NCTC8325 ------------------------------------------------------------
Newman ------------------------------------------------------------
USA300_FPR3757 MRNFLMFLAIIIFLSLFILLTSFFLIIRNFHIIVKFFYEKNVFNVDNTKISYYIRFTKGG
N315 --MKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDI
NCTC8325 --MKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDI
Newman --MKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDI
USA300_FPR3757 DNMKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDI
**********************************************************
N315 FLGNEYENFVFTNDKKKSIILAFKEKQTS
NCTC8325 FLGNEYENFVFTNDKKKSIILAFKEKQTS
Newman FLGNEYENFVFTNDKKKSIILAFKEKQTS
USA300_FPR3757 FLGNEYENFVFTNDKKKSIILAFKEKQTS
*****************************