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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004998000
- symbol?: pmtB
- synonym:
- description?: ABC-2 transporter family protein
- ABC-2 transporter family protein
- phenol-soluble modulin export ABC transporter permease subunit PmtB
- PSM ABC-transporter PmtB subunit
- membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5179803..5180483
- synteny block?: BlockID0038790
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1890
08BA02176:
C248_2019
11819-97:
MS7_1967
6850:
RSAU_001827 (pmtB)
71193:
ST398NM01_2053
ECT-R 2:
ECTR2_1804
ED133:
SAOV_2034
ED98:
SAAV_1999
HO 5096 0412:
SAEMRSA15_18480
JH1:
SaurJH1_2022
JH9:
SaurJH9_1989
JKD6008:
SAA6008_01964
JKD6159:
SAA6159_01863
LGA251:
SARLGA251_18160
M013:
M013TW_1969
MRSA252:
SAR2024
MSHR1132:
SAMSHR1132_17760
MSSA476:
SAS1856
Mu3:
SAHV_1917
Mu50:
SAV1932
MW2:
MW1873
RF122:
SAB1868c
ST398:
SAPIG2053
T0131:
SAT0131_02062
TCH60:
HMPREF0772_11209
TW20:
SATW20_19260
USA300_TCH1516:
USA300HOU_1935
VC40:
SAVC_08920
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHL
N315 MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHL
NCTC8325 MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHL
Newman MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHL
USA300_FPR3757 MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHL
************************************************************
COL FRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEADVIEPNSI
N315 FRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEADVIEPNSI
NCTC8325 FRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEADVIEPNSI
Newman FRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEADVIEPNSI
USA300_FPR3757 FRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEADVIEPNSI
************************************************************
COL YFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVL
N315 YFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVL
NCTC8325 YFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVL
Newman YFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVL
USA300_FPR3757 YFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVL
************************************************************
COL SQSSFPDLYSYILNIGFLIISIVILIVNYFKQLNKINTRKFKGGSR
N315 SQSSFPDLYSYILNIGFLIISIVILIVNYFKQLNKINTRKFKGGSR
NCTC8325 SQSSFPDLYSYILNIGFLIISIVILIVNYFKQLNKINTRKFKGGSR
Newman SQSSFPDLYSYILNIGFLIISIVILIVNYFKQLNKINTRKFKGGSR
USA300_FPR3757 SQSSFPDLYSYILNIGFLIISIVILIVNYFKQLNKINTRKFKGGSR
**********************************************