PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004935000
• symbol^?: pcrB
• synonym:
• description^?: geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase

  descriptions from strain specific annotations:

  • geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
  • geranylgeranylglyceryl phosphate synthase-like protein
  • geranylgeranylglyceryl phosphate synthase
  • heptaprenylglyceryl phosphate synthase
  • PcrB-like replication protein
  • Phosphoglycerol geranylgeranyltransferase
  • putative glycerol-1-phosphate prenyltransferase
  • (S)-3-O-geranylgeranylglyceryl phosphate synthase
  • geranylgeranylglyceryl diphosphate synthase
  • geranylgeranylglyceryl phosphate synthase family protein
  • PcrB family protein
  • PcrB family replication protein
  • protein PcrB
• strand^?: -
• coordinates^?: 5126096..5126788
• synteny block^?: BlockID0038400
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1967
N315:
SA1722 (pcrB)
NCTC8325:
SAOUHSC_02124
Newman:
NWMN_1844 (pcrB)
USA300_FPR3757:
SAUSA300_1887 (pcrB)
04-02981:
SA2981_1863 (pcrB)
08BA02176:
C248_1981 (pcrB)
11819-97:
MS7_1941 (pcrB)
6850:
RSAU_001793 (pcrB)
71193:
ST398NM01_2000
ECT-R 2:
ECTR2_1778
ED133:
SAOV_2008
ED98:
SAAV_1972
HO 5096 0412:
SAEMRSA15_18130 (pcrB)
JH1:
SaurJH1_1995
JH9:
SaurJH9_1961
JKD6008:
SAA6008_01927 (pcrB)
JKD6159:
SAA6159_01837 (pcrB)
LGA251:
SARLGA251_17910 (pcrB)
M013:
M013TW_1943
MRSA252:
SAR1998 (pcrB)
MSHR1132:
SAMSHR1132_17510
MSSA476:
SAS1829
Mu3:
SAHV_1891 (pcrB)
Mu50:
SAV1906 (pcrB)
MW2:
MW1847 (pcrB)
RF122:
SAB1841c
ST398:
SAPIG2000
T0131:
SAT0131_02033 (smpB)
TCH60:
HMPREF0772_11236 (pcrB)
TW20:
SATW20_19010 (pcrB)
USA300_TCH1516:
USA300HOU_1907 (pcrB)
VC40:
SAVC_08790

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRVRRYPL
  N315            MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRIRRYPL
  NCTC8325        MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRVRRYPL
  Newman          MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRVRRYPL
  USA300_FPR3757  MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRVRRYPL
                  ******************************************************:*****
  
  COL             PLVLEISNIESVMPGFDFYFVPTVLNSTDVVFHNGTLLEALKTYGHSIDFEEVIFEGYVV
  N315            PLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVV
  NCTC8325        PLVLEISNIESVMPGFDFYFVPTVLNSTDVVFHNGTLLEALKTYGHSIDFEEVIFEGYVV
  Newman          PLVLEISNIESVMPGFDFYFVPTVLNSTDVVFHNGTLLEALKTYGHSIDFEEVIFEGYVV
  USA300_FPR3757  PLVLEISNIESVMPGFDFYFVPTVLNSTDVVFHNGTLLEALKTYGHSIDFEEVIFEGYVV
                  ******************************.*****************************
  
  COL             CNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLT
  N315            CNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLT
  NCTC8325        CNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLT
  Newman          CNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLT
  USA300_FPR3757  CNADSKMAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLT
                  ******:*****************************************************
  
  COL             ETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
  N315            ETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
  NCTC8325        ETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
  Newman          ETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
  USA300_FPR3757  ETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
                  **************************************************