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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003921000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- DUF1405 domain-containing protein
- hypothetical protein with DUF1405
- membrane spanning protein
- putative transmembrane protein
- YpjA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4242365..4242673
- synteny block?: BlockID0029670
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1417
08BA02176:
C248_1501
11819-97:
MS7_1417
6850:
RSAU_001333
71193:
ST398NM01_1461
ECT-R 2:
ECTR2_1315
ED133:
SAOV_1469
ED98:
SAAV_1448
HO 5096 0412:
SAEMRSA15_13220
JH1:
SaurJH1_1549
JH9:
SaurJH9_1520
JKD6008:
SAA6008_01430
JKD6159:
SAA6159_01326
LGA251:
SARLGA251_13750
M013:
M013TW_1409
MRSA252:
SAR1472
MSHR1132:
SAMSHR1132_13010
MSSA476:
SAS1404
Mu3:
SAHV_1449
Mu50:
SAV1461
MW2:
MW1351
RF122:
SAB1325c
ST398:
SAPIG1461
T0131:
SAT0131_01550
TCH60:
HMPREF0772_11743
TW20:
SATW20_14600
USA300_TCH1516:
USA300HOU_1399
VC40:
SAVC_06560
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTIKAFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPWHFKIFVPDSPTAILYL
N315 MTINTFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPWHFKIFVPDSPTAILYL
NCTC8325 MTIKAFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPWHFKIFVPDSPTAILYL
Newman MTIKAFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPWHFKIFVPDSSTAILYL
USA300_FPR3757 MTIKAFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPWHFKIFVPDSPTAILYL
***::************************************************.******
COL VISISLILIQKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQGDITVNGLVLMFSHSIMA
N315 VISISLILIQKQNSIIEALAFVTLFKYGIWAVIMNILFIIEQGDITVNGLVLMFSHSIMA
NCTC8325 VISISLILIQKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQGDITVNGLVLMFSHSIMA
Newman VISISLILIQKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQGDITVNGLVLMFSHSIMA
USA300_FPR3757 VISISLILIQKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQGDITVNGLVLMFSHSIMA
****************:*******************************************
COL VQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYYDFITTHVWQIGVLSCCLSVF
N315 VQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYYDFITTHVWQIGVLSCCLSVF
NCTC8325 VQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYYDFITTHVWQIGVLSCCLSVF
Newman VQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYYDFITTHVWQIGVLSCCLSVF
USA300_FPR3757 VQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYYDFITTHVWQIGVLSCCLSVF
************************************************************
COL GLLLYIELNKLLKCK
N315 GLLLYIELNKLLKCK
NCTC8325 GLLLYIELNKLLKCK
Newman GLLLYIELNKLLKCK
USA300_FPR3757 GLLLYIELNKLLKCK
***************