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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004901000
- symbol?: vraT
- synonym:
- description?: transporter
- transporter
- cell wall-active antibiotics response protein
- cell wall-active antibiotics response protein LiaF
- membrane protein with DUF2154
- transporter associated with VraSR
- Transporter yvqF
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5096899..5097429
- synteny block?: BlockID0038070
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1842 (yvqF)
08BA02176:
C248_1958
11819-97:
MS7_1921
6850:
RSAU_001773
71193:
ST398NM01_1979
ECT-R 2:
ECTR2_1757
ED133:
SAOV_1984
ED98:
SAAV_1951
HO 5096 0412:
SAEMRSA15_17930
JH1:
SaurJH1_1974
JH9:
SaurJH9_1940
JKD6008:
SAA6008_01906
JKD6159:
SAA6159_01817
LGA251:
SARLGA251_17680
M013:
M013TW_1922
MRSA252:
SAR1976
MSHR1132:
SAMSHR1132_17310
MSSA476:
SAS1808
Mu3:
SAHV_1871
Mu50:
SAV1886
MW2:
MW1826
RF122:
SAB1818c
ST398:
SAPIG1979
T0131:
SAT0131_02010 (trxB)
TCH60:
HMPREF0772_11258
TW20:
SATW20_18800
USA300_TCH1516:
USA300HOU_1882
VC40:
SAVC_08685
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAF
N315 MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAF
NCTC8325 MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAF
Newman MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAF
USA300_FPR3757 MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAF
************************************************************
COL WIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWF
N315 WIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWF
NCTC8325 WIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWF
Newman WIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWF
USA300_FPR3757 WIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWF
************************************************************
COL GEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNIN
N315 GEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNIN
NCTC8325 GEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNIN
Newman GEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNIN
USA300_FPR3757 GEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNIN
************************************************************
COL LHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
N315 LHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
NCTC8325 LHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
Newman LHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
USA300_FPR3757 LHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
*****************************************************