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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004432000
- symbol?: —
- synonym:
- description?: polysaccharide biosynthesis protein
- polysaccharide biosynthesis protein
- polysaccharide biosynthesis protein, putative
- spore cortex protein
- export protein for polysaccharides and teichoic acids
- matE family protein
- Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids
- polysaccharide transporter
- polysaccharide transport protein
- putative polysaccharide biosynthesis protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4679112..4680773
- synteny block?: BlockID0034300
- occurrence?: in 100% of 33 strains
Suggest description of "lipid II flippase" and symbol of murJ to harmonize with PMID 36825883
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1712
08BA02176:
C248_1801
11819-97:
MS7_1760
6850:
RSAU_001611
71193:
ST398NM01_1807
ECT-R 2:
ECTR2_1594
ED133:
SAOV_1740
ED98:
SAAV_1764
HO 5096 0412:
SAEMRSA15_16620
JH1:
SaurJH1_1844
JH9:
SaurJH9_1809
JKD6008:
SAA6008_01726
JKD6159:
SAA6159_01677
LGA251:
SARLGA251_16440
M013:
M013TW_1769
MRSA252:
SAR1839
MSHR1132:
SAMSHR1132_16040
MSSA476:
SAS1680
Mu3:
SAHV_1740
Mu50:
SAV1754
MW2:
MW1697
RF122:
SAB1614c
ST398:
SAPIG1807
T0131:
SAT0131_01863
TCH60:
HMPREF0772_11398
TW20:
SATW20_17440
USA300_TCH1516:
USA300HOU_1745
VC40:
SAVC_07980
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAPFTYAYAPYNIAIAVAT
N315 MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAPFTYAYAPYNIAIAVAT
NCTC8325 MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAPFTYAYAPYNIAIAVAT
Newman MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAPFTYAYAPYNIAIAVAT
USA300_FPR3757 MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAPFTYAYAPYNIAIAVAT
************************************************************
COL AGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGFLVLYFLAPYISELTLARN
N315 AGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGFLVLYFLAPYISELTLARN
NCTC8325 AGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGFLVLYFLAPYISELTLARN
Newman AGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGFLVLYFLAPYISELTLARN
USA300_FPR3757 AGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGFLVLYFLAPYISELTLARN
************************************************************
COL IHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYKSMGPTAVSEVTEQIARVIFI
N315 IHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYKSMGPTAVSEVTEQIARVIFI
NCTC8325 IHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYKSMGPTAVSEVTEQIARVIFI
Newman IHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYKSMGPTAVSEVTEQIARVIFI
USA300_FPR3757 IHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYKSMGPTAVSEVTEQIARVIFI
************************************************************
COL LIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLWYYWRKRKHNIDRMVESDYTDID
N315 LIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLWYYWRKRKHNIDRMVESDYTDID
NCTC8325 LIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLWYYWRKRKHNIDRMVESDYTDID
Newman LIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLWYYWRKRKHNIDRMVESDYTDID
USA300_FPR3757 LIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLWYYWRKRKHNIDRMVESDYTDID
************************************************************
COL VSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHNGALSLVGIPSQLQDIFFNMLNMST
N315 VSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHNGALSLVGIPSQLQDIFFNMLNMST
NCTC8325 VSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHNGALSLVGIPSQLQDIFFNMLNMST
Newman VSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHNGALSLVGIPSQLQDIFFNMLNMST
USA300_FPR3757 VSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHNGALSLVGIPSQLQDIFFNMLNMST
************************************************************
COL NKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEMHHQIRTSIGVLMFITVPASIGIMALA
N315 NKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEMHHQIRTSIGVLMFITVPASIGIMALA
NCTC8325 NKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEMHHQIRTSIGVLMFITVPASIGIMALA
Newman NKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEMHHQIRTSIGVLMFITVPASIGIMALA
USA300_FPR3757 NKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEMHHQIRTSIGVLMFITVPASIGIMALA
************************************************************
COL QPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAPVAILISLLSVTASMLQGIDKQKLTVYVI
N315 QPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAPVAILISLLSVTASMLQGIDKQKLTVYVI
NCTC8325 QPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAPVAILISLLSVTASMLQGIDKQKLTVYVI
Newman QPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAPVAILISLLSVTASMLQGIDKQKLTVYVI
USA300_FPR3757 QPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAPVAILISLLSVTASMLQGIDKQKLTVYVI
************************************************************
COL LASVVIKLALNYPLIMLFHTPGAILSTSIALLFAIGCNFYILKKYAKFKFSYSWIHFAKI
N315 LASVVIKLALNYPLIMLFHTPGAILSTSIALLFAIGCNFYILKKYAKFKFSYSWIHFAKI
NCTC8325 LASVVIKLALNYPLIMLFHTPGAILSTSIALLFAIGCNFYILKKYAKFKFSYSWIHFAKI
Newman LASVVIKLALNYPLIMLFHTPGAILSTSIALLFAIGCNFYILKKYAKFKFSYSWIHFAKI
USA300_FPR3757 LASVVIKLALNYPLIMLFHTPGAILSTSIALLFAIGCNFYILKKYAKFKFSYSWIHFAKI
************************************************************
COL FLYSFIMMLGVELVFFLANLFLEPTKLGYLIIIILGVTVGILIYGTITIKTRLADEFLGE
N315 FLYSFIMMLGVELVFFLANLFLEPTKLGYLIIIILGVTVGILIYGTITIKTRLADEFLGE
NCTC8325 FLYSFIMMLGVELVFFLANLFLEPTKLGYLIIIILGVTVGILIYGTITIKTRLADEFLGE
Newman FLYSFIMMLGVELVFFLANLFLEPTKLGYLIIIILGVTVGILIYGTITIKTRLADEFLGE
USA300_FPR3757 FLYSFIMMLGVELVFFLANLFLEPTKLGYLIIIILGVTVGILIYGTITIKTRLADEFLGE
************************************************************
COL IPEKLRRRVRFLR
N315 IPEKLRRRVRFLR
NCTC8325 IPEKLRRRVRFLR
Newman IPEKLRRRVRFLR
USA300_FPR3757 IPEKLRRRVRFLR
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