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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004367000
- symbol?: thiI
- synonym:
- description?: thiamine biosynthesis protein ThiI
- thiamine biosynthesis protein ThiI
- tRNA 4-thiouridine(8) synthase ThiI
- putative thiamine biosynthesis protein
- thiamine biosynthesis/tRNA modification protein ThiI
- tRNA sulfurtransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4606624..4607847
- synteny block?: BlockID0033720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1673 (thiI)
08BA02176:
C248_1756 (thiI)
11819-97:
MS7_1721 (thiI)
6850:
RSAU_001572 (thiI)
71193:
ST398NM01_1768
ECT-R 2:
ECTR2_1555 (thiI)
ED133:
SAOV_1702
ED98:
SAAV_1725 (thiI)
HO 5096 0412:
SAEMRSA15_16240 (thiI)
JH1:
SaurJH1_1806
JH9:
SaurJH9_1771
JKD6008:
SAA6008_01683 (thiI)
JKD6159:
SAA6159_01639 (thiI)
LGA251:
SARLGA251_16060 (thiI)
M013:
M013TW_1728
MRSA252:
SAR1793 (thiI)
MSHR1132:
SAMSHR1132_15650
MSSA476:
SAS1642
Mu3:
SAHV_1701
Mu50:
SAV1715
MW2:
MW1658
RF122:
SAB1574c
ST398:
SAPIG1768 (thiI)
T0131:
SAT0131_01818 (tagH)
TCH60:
HMPREF0772_11437 (thiI)
TW20:
SATW20_17060 (thiI)
USA300_TCH1516:
USA300HOU_1702 (thiI)
VC40:
SAVC_07785
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADI
N315 MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADI
NCTC8325 MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADI
Newman MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADI
USA300_FPR3757 MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADI
************************************************************
COL NEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMD
N315 NEITYRLSKIFGIKSISPVLKVEKTIEAMSAAAIKFAQQFEENSTFKIDVKRADKNFPMD
NCTC8325 NEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMD
Newman NEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMD
USA300_FPR3757 NEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMD
****************************:*******************************
COL TYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKT
N315 TYELQRELGGTVLKQIENVSVNVKRADHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKT
NCTC8325 TYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKT
Newman TYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKT
USA300_FPR3757 TYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKT
**********:***:::*:******.**********************************
COL LLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLH
N315 LLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLH
NCTC8325 LLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLH
Newman LLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLH
USA300_FPR3757 LLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLH
************************************************************
COL IVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHS
N315 IVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHS
NCTC8325 IVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHS
Newman IVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHS
USA300_FPR3757 IVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHS
************************************************************
COL MYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFD
N315 MYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFE
NCTC8325 MYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFD
Newman MYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFD
USA300_FPR3757 MYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFD
***********************************************************:
COL KVVQYESVFDFEEMINRAVENIETLEITSDYKTIKEQQTNQLINDFL
N315 KVVQYESVFDFEEMINRAVENIETLEITSDYKTIKEQQTNQLINDFL
NCTC8325 KVVQYESVFDFEEMINRAVENIETLEITSDYKTIKEQQTNQLINDFL
Newman KVVQYESVFDFEEMINRAVENIETLEITSDYKTIKEQQTNQLINDFL
USA300_FPR3757 KVVQYESVFDFEEMINRAVENIETLEITSDYKTIKEQQTNQLINDFL
***********************************************