PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004355000
• symbol^?: uspA2
• synonym:
• description^?: universal stress protein

  descriptions from strain specific annotations:

  • universal stress protein
  • universal stress protein family protein
  • putative universal stress protein
  • transcription factor
  • universal stress family protein
  • Universal stress protein family
  • universal stress protein family, putative
  • UspA domain-containing protein
• strand^?: +
• coordinates^?: 4597239..4597670
• synteny block^?: BlockID0033600
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1753
N315:
SA1528
NCTC8325:
SAOUHSC_01814
Newman:
NWMN_1600
USA300_FPR3757:
SAUSA300_1652
04-02981:
SA2981_1664
08BA02176:
C248_1747
11819-97:
MS7_1712
6850:
RSAU_001563
71193:
ST398NM01_1759
ECT-R 2:
ECTR2_1546
ED133:
SAOV_1693
ED98:
SAAV_1715
HO 5096 0412:
SAEMRSA15_16150
JH1:
SaurJH1_1796
JH9:
SaurJH9_1762
JKD6008:
SAA6008_01674 (uspA_2)
JKD6159:
SAA6159_01629 (uspA_2)
LGA251:
SARLGA251_15970
M013:
M013TW_1718
MRSA252:
SAR1784
MSHR1132:
SAMSHR1132_15560
MSSA476:
SAS1633
Mu3:
SAHV_1692
Mu50:
SAV1706
MW2:
MW1649
RF122:
SAB1564
ST398:
SAPIG1759
T0131:
SAT0131_01809 (opp1A)
TCH60:
HMPREF0772_11446
TW20:
SATW20_16970
USA300_TCH1516:
USA300HOU_1692
VC40:
SAVC_07740

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQASIKAGVHLNKLTEER
  N315            MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQASIKAGVHLNKLTEER
  NCTC8325        MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQASIKAGVHLNKLTEER
  Newman          MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQASIKAGVHLNKLTEER
  USA300_FPR3757  MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQASIKAGVHLNKLTEER
                  ************************************************************
  
  COL             SKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGS
  N315            SKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGS
  NCTC8325        SKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGS
  Newman          SKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGS
  USA300_FPR3757  SKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGS
                  ************************************************************
  
  COL             VSHKVAKRATIPVLIVK
  N315            VSHKVAKRATIPVLIVK
  NCTC8325        VSHKVAKRATIPVLIVK
  Newman          VSHKVAKRATIPVLIVK
  USA300_FPR3757  VSHKVAKRATIPVLIVK
                  *****************