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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004221000
- symbol?: mnmA
- synonym:
- description?: tRNA 2-thiouridine(34) synthase MnmA
- tRNA 2-thiouridine(34) synthase MnmA
- tRNA-specific 2-thiouridylase MnmA
- tRNA-specific 5-methylaminomethyl-2-thiouridylate-methyltransferase
- tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
- 5-methylaminomethyl-2-thiouridylate- methyltransferase tRNA
- tRNA methyl transferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4471865..4472638
- synteny block?: BlockID0032490
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1579
08BA02176:
C248_1663
11819-97:
MS7_1637 (trmU)
6850:
RSAU_001483 (trmU)
71193:
ST398NM01_1685
ECT-R 2:
ECTR2_1470 (trmU)
ED133:
SAOV_1619 (trmU)
ED98:
SAAV_1614 (mnmA)
HO 5096 0412:
SAEMRSA15_15390
JH1:
SaurJH1_1712 (mnmA)
JH9:
SaurJH9_1679 (mnmA)
JKD6008:
SAA6008_01591 (trmU)
JKD6159:
SAA6159_01554 (trmU)
LGA251:
SARLGA251_15240
M013:
M013TW_1642
MRSA252:
SAR1701 (mnmA)
MSHR1132:
SAMSHR1132_14580
MSSA476:
SAS1557 (mnmA)
Mu3:
SAHV_1608 (mnmA)
Mu50:
SAV1621 (mnmA)
MW2:
MW1571 (mnmA)
RF122:
SAB1492c (mnmA)
ST398:
SAPIG1685 (trmU)
T0131:
SAT0131_01718
TCH60:
HMPREF0772_11520 (trmU)
TW20:
SATW20_16160
USA300_TCH1516:
USA300HOU_1621 (mnmA)
VC40:
SAVC_07355 (mnmA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIE
N315 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIE
Newman MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIE
USA300_FPR3757 -----------MSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIE
*************************************************
COL VCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHAMNLGA
N315 VCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHAMNLGA
Newman VCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHAMNLGA
USA300_FPR3757 VCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHAMNLGA
************************************************************
COL DYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEKSEVRR
N315 DYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEKSEVRR
Newman DYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEKSEVRR
USA300_FPR3757 DYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEKSEVRR
************************************************************
COL IAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQPGDMITLDGKKMGKHSGLMYYTI
N315 IAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQPGDMITLDGKKMGKHSGLMYYTI
Newman IAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQPGDMITLDGKKMGKHSGLMYYTI
USA300_FPR3757 IAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQPGDMITLDGKKMGKHSGLMYYTI
************************************************************
COL GQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHDALYSDYLIASDYSFVNPEDNDLDQ
N315 GQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHDALYSDYLIASDYSFVNPEDNDLDQ
Newman GQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHDALYSDYLIASDYSFVNPEDNDLDQ
USA300_FPR3757 GQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHDALYSDYLIASDYSFVNPEDNDLDQ
************************************************************
COL GFECTAKFRYRQKDTKVFVKRENDHALRVTFAEPVRAITPGQAVVFYQGDVCLGGATIDD
N315 GFECTAKFRYRQKDTKVFVKRENDHALRVTFAEPVRAITPGQAVVFYQGDVCLGGATIDD
Newman GFECTAKFRYRQKDTKVFVKRENDHALRVTFAEPVRAITPGQAVVFYQGDVCLGGATIDD
USA300_FPR3757 GFECTAKFRYRQKDTKVFVKRENDHALRVTFAEPVRAITPGQAVVFYQGDVCLGGATIDD
************************************************************
COL VFKNEGQLNYVV
N315 VFKNEGQLNYVV
Newman VFKNEGQLNYVV
USA300_FPR3757 VFKNEGQLNYVV
************