PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004176000
• symbol^?: comEA
• synonym:
• description^?: competence protein ComE

  descriptions from strain specific annotations:

  • competence protein ComE
  • ComEA family DNA-binding protein
  • ComE operon protein 1
  • comE operon protein 1-like protein
  • comE operon protein 1-related protein ComEA
  • competence protein ComEA
  • Late competence protein ComEA, DNA receptor
  • comE operon protein 1-related protein
  • competence ComEA helix-hairpin-helix repeat region domain protein
  • competence protein ComEA helix-hairpin-helix repeat region domain protein
  • competence-related membrane protein
• strand^?: -
• coordinates^?: 4440595..4441302
• synteny block^?: BlockID0032060
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1646 (comEA)
N315:
SA1418
NCTC8325:
SAOUHSC_01693
Newman:
NWMN_1492 (comEA)
USA300_FPR3757:
SAUSA300_1549
04-02981:
SA2981_1548 (comEA)
08BA02176:
C248_1632
11819-97:
MS7_1607
6850:
RSAU_001454 (comEA)
71193:
ST398NM01_1655
ECT-R 2:
ECTR2_1439
ED133:
SAOV_1589
ED98:
SAAV_1581 (comEA)
HO 5096 0412:
SAEMRSA15_15090
JH1:
SaurJH1_1682
JH9:
SaurJH9_1647
JKD6008:
SAA6008_01560 (comEA)
JKD6159:
SAA6159_01525 (comEA)
LGA251:
SARLGA251_14950
M013:
M013TW_1604
MRSA252:
SAR1667
MSHR1132:
SAMSHR1132_14290
MSSA476:
SAS1527
Mu3:
SAHV_1577
Mu50:
SAV1590
MW2:
MW1541
RF122:
SAB1462c
ST398:
SAPIG1655
T0131:
SAT0131_01685 (radA)
TCH60:
HMPREF0772_11551 (comEA)
TW20:
SATW20_15850
USA300_TCH1516:
USA300HOU_1591 (comEA)
VC40:
SAVC_07205

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MVLLYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTS
  N315            ---MYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTS
  NCTC8325        MVLLYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTS
  Newman          ---MYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTS
  USA300_FPR3757  MVLLYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTS
                     :******************:*************************************
  
  COL             ENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDA
  N315            ENNSLSKLEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDA
  NCTC8325        ENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDA
  Newman          ENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDA
  USA300_FPR3757  ENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDA
                  **.****:*************************************************:**
  
  COL             DVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKNGNTNNTKVNLNTASVSELMS
  N315            DVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKNGNTNNTKVNLNTASVSELMS
  NCTC8325        DVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKNGNTNNTKVNLNTASVSELMS
  Newman          DVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKNGNTNNTKVNLNTASVSELMS
  USA300_FPR3757  DVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKNGNTNNTKVNLNTASVSELMS
                  ***:********************************* **********************
  
  COL             VPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT
  N315            VPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI
  NCTC8325        VPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT
  Newman          VPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT
  USA300_FPR3757  VPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT
                  ***********************************************