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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004172000
- symbol?: rpsT
- synonym:
- description?: 30S ribosomal protein S20
- 30S ribosomal protein S20
- putative 30S ribosomal protein S20
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4436493..4436753
- synteny block?: BlockID0032020
- occurrence?: in 100% of 34 strains
rpsT : 30S ribosomal protein S20 [1]
• Two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S20 is also known as "bS20" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1544 (rpsT)
08BA02176:
C248_1628 (rpsT)
11819-97:
MS7_1603 (rpsT)
6850:
RSAU_001450 (rpsT)
71193:
ST398NM01_1651
ECT-R 2:
ECTR2_1435 (rpsT)
ED133:
SAOV_1585 (rpsT)
ED98:
SAAV_1577 (rpsT)
HO 5096 0412:
SAEMRSA15_15050 (rpsT)
JH1:
SaurJH1_1678 (rpsT)
JH9:
SaurJH9_1643 (rpsT)
JKD6008:
SAA6008_01555 (rpsT)
JKD6159:
SAA6159_01521 (rpsT)
JSNZ:
JSNZ_001576 (rpsT)
LGA251:
SARLGA251_14910 (rpsT)
M013:
M013TW_1600
MRSA252:
SAR1663 (rpsT)
MSHR1132:
SAMSHR1132_14250
MSSA476:
SAS1523 (rpsT)
Mu3:
SAHV_1573 (rpsT)
Mu50:
SAV1586 (rpsT)
MW2:
MW1537 (rpsT)
RF122:
SAB1458 (rpsT)
ST398:
SAPIG1651 (rpsT)
T0131:
SAT0131_01681
TCH60:
HMPREF0772_11555 (rpsT)
TW20:
SATW20_15810 (rpsT)
USA300_TCH1516:
USA300HOU_1587 (rpsT)
VC40:
SAVC_07185 (rpsT)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKA
N315 MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKA
NCTC8325 MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKA
Newman MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKA
USA300_FPR3757 MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKA
************************************************************
COL AQSNLIHSNKADRIKSQLMTANK
N315 AQSNLIHSNKADRIKSQLMTANK
NCTC8325 AQSNLIHSNKADRIKSQLMTANK
Newman AQSNLIHSNKADRIKSQLMTANK
USA300_FPR3757 AQSNLIHSNKADRIKSQLMTANK
***********************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)