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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003937000
- symbol?: rpsA
- synonym:
- description?: 30S ribosomal protein S1
- 30S ribosomal protein S1
- 30S ribosomalprotein S1p
- putative 30S ribosomal protein S1
- putative 30S ribosomal protein S1 homolog
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4255467..4256642
- synteny block?: BlockID0029830
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1432
08BA02176:
C248_1515
11819-97:
MS7_1430 (rpsA)
6850:
RSAU_001347 (rpsA)
71193:
ST398NM01_1474
ECT-R 2:
ECTR2_1328
ED133:
SAOV_1482 (rpsA)
ED98:
SAAV_1463 (rpsA)
HO 5096 0412:
SAEMRSA15_13360
JH1:
SaurJH1_1563 (rpsA)
JH9:
SaurJH9_1533 (rpsA)
JKD6008:
SAA6008_01444 (rpsA)
JKD6159:
SAA6159_01340 (rpsA)
LGA251:
SARLGA251_13880
M013:
M013TW_1423
MRSA252:
SAR1485 (rpsA)
MSHR1132:
SAMSHR1132_13150
MSSA476:
SAS1417 (rpsA)
Mu3:
SAHV_1464 (rpsA)
Mu50:
SAV1476 (rpsA)
MW2:
MW1365 (rpsA)
RF122:
SAB1338c (rpsA)
ST398:
SAPIG1474
T0131:
SAT0131_01564 (hsdM)
TCH60:
HMPREF0772_11730 (rpsA)
TW20:
SATW20_14730
USA300_TCH1516:
USA300HOU_1413 (rpsA)
VC40:
SAVC_06630 (rpsA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEV
N315 MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEV
NCTC8325 MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEV
Newman MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEV
USA300_FPR3757 MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEV
************************************************************
COL VKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVK
N315 VKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVK
NCTC8325 VKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVK
Newman VKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVK
USA300_FPR3757 VKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVK
************************************************************
COL GGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKAVEQEEN
N315 GGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKAVEQEEN
NCTC8325 GGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKAVEQEEN
Newman GGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKAVEQEEN
USA300_FPR3757 GGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKAVEQEEN
************************************************************
COL DAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIG
N315 DAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIG
NCTC8325 DAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIG
Newman DAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIG
USA300_FPR3757 DAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIG
*****************.******************************************
COL QDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAP
N315 QDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAP
NCTC8325 QDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAP
Newman QDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAP
USA300_FPR3757 QDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAP
************************************************************
COL GVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNEDVVESD
N315 GVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNEDVVESD
NCTC8325 GVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNEDVVESD
Newman GVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNEDVVESD
USA300_FPR3757 GVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNEDVVESD
************************************************************
COL PSTTKAYLENEEEDNPTIGDMIGDKLKNLKL
N315 PSTTKAYLENEEEDNPTIGDMIGDKLKNLKL
NCTC8325 PSTTKAYLENEEEDNPTIGDMIGDKLKNLKL
Newman PSTTKAYLENEEEDNPTIGDMIGDKLKNLKL
USA300_FPR3757 PSTTKAYLENEEEDNPTIGDMIGDKLKNLKL
*******************************