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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003923000
- symbol?: —
- synonym:
- description?: TPR domain protein
- TPR domain protein
- anaphase-promoting complex, cyclosome, subunit 3 family protein
- putative PEP-CTERM system TPR-repeat lipoprotein
- tetratricopeptide (TPR) domain protein
- tetratricopeptide repeat domain protein
- TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4243535..4244638
- synteny block?: BlockID0029690
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1419
08BA02176:
C248_1503
11819-97:
MS7_1419
6850:
RSAU_001335
71193:
ST398NM01_1463
ECT-R 2:
ECTR2_1317
ED133:
SAOV_1471
ED98:
SAAV_1450
HO 5096 0412:
SAEMRSA15_13240
JH1:
SaurJH1_1551
JH9:
SaurJH9_1522
JKD6008:
SAA6008_01432
JKD6159:
SAA6159_01328
LGA251:
SARLGA251_13770
M013:
M013TW_1411
MRSA252:
SAR1474
MSHR1132:
SAMSHR1132_13030
MSSA476:
SAS1406
Mu3:
SAHV_1451
Mu50:
SAV1463
MW2:
MW1353
RF122:
SAB1327c
ST398:
SAPIG1463
T0131:
SAT0131_01552
TCH60:
HMPREF0772_11741
TW20:
SATW20_14620
USA300_TCH1516:
USA300HOU_1401
VC40:
SAVC_06570
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYH
N315 MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYH
NCTC8325 -----------------------------------------------MPQGLEVFRVLYH
Newman MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYH
USA300_FPR3757 -----------------------------------------------MPQGLEVFRVLYH
*************
COL KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
N315 KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
NCTC8325 KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
Newman KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
USA300_FPR3757 KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
************************************************************
COL EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
N315 EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
NCTC8325 EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
Newman EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
USA300_FPR3757 EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
************************************************************
COL GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
N315 GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
NCTC8325 GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
Newman GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
USA300_FPR3757 GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
************************************************************
COL QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
N315 QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
NCTC8325 QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
Newman QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
USA300_FPR3757 QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
************************************************************
COL YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
N315 YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
NCTC8325 YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
Newman YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
USA300_FPR3757 YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
************************************************************
COL AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
N315 AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
NCTC8325 AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
Newman AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
USA300_FPR3757 AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
******************************************************