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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003890000
- symbol?: norB
- synonym:
- description?: quinolone resistance protein NorB
- quinolone resistance protein NorB
- drug transporter
- major facilitator superfamily transporter
- putative drug transporter
- Major facilitator family transporter
- drug transporter, putative
- major facilitator superfamily protein
- major facilitator transporter
- multidrug resistance protein B
- putative transporter
- transmembrane efflux protein
- transporter protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4210227..4211632
- synteny block?: BlockID0029360
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1391
08BA02176:
C248_1475
11819-97:
MS7_1392
6850:
—
71193:
ST398NM01_1435
ECT-R 2:
ECTR2_1290
ED133:
SAOV_1445
ED98:
SAAV_1420
HO 5096 0412:
SAEMRSA15_12980
JH1:
SaurJH1_1525
JH9:
SaurJH9_1496
JKD6008:
SAA6008_01404
JKD6159:
SAA6159_01301
LGA251:
SARLGA251_13510
M013:
M013TW_1383
MRSA252:
SAR1448
MSHR1132:
SAMSHR1132_12770
MSSA476:
SAS1379
Mu3:
SAHV_1424
Mu50:
SAV1436
MW2:
MW1325
RF122:
SAB1301c
ST398:
SAPIG1435
T0131:
SAT0131_01522
TCH60:
HMPREF0772_11770
TW20:
SATW20_14360
USA300_TCH1516:
USA300HOU_1373
VC40:
SAVC_06435
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSFNTDIGTVNIAVSITAL
N315 MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSFNTDIGTVNIAVSITAL
NCTC8325 MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSFNTDIGTVNIAVSITAL
Newman MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSFNTDIGTVNIAVSITAL
USA300_FPR3757 MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSFNTDIGTVNIAVSITAL
************************************************************
COL FSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIPLLLIIGRLIQGLSAACIM
N315 FSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIPLLLIIGRLIQGLSAACIM
NCTC8325 FSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIPLLLIIGRLIQGLSAACIM
Newman FSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIPLLLIIGRLIQGLSAACIM
USA300_FPR3757 FSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIPLLLIIGRLIQGLSAACIM
************************************************************
COL PATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGAVATLLGWRWIFILSIIISLI
N315 PATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGAVATLLGWRWIFILSIIISLI
NCTC8325 PATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGAVATLLGWRWIFILSIIISLI
Newman PATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGAVATLLGWRWIFILSIIISLI
USA300_FPR3757 PATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGAVATLLGWRWIFILSIIISLI
************************************************************
COL ALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNILITKGSELGVTSLLFITLLAIA
N315 ALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLTLNILITKGSELGVTSLLFITLLAIA
NCTC8325 ALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNILITKGSELGVTSLLFITLLAIA
Newman ALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNILITKGSELGVTSLLFITLLAIA
USA300_FPR3757 ALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNILITKGSELGVTSLLFITLLAIA
**********************************:*************************
COL IGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASNFLLNGVAGTLIVANTFVQRGLGYS
N315 IGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASNFLLNGVAGTLIVANTFVQRGLGYS
NCTC8325 IGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASNFLLNGVAGTLIVANTFVQRGLGYS
Newman IGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASNFLLNGVAGTLIVANTFVQRGLGYS
USA300_FPR3757 IGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASNFLLNGVAGTLIVANTFVQRGLGYS
************************************************************
COL SLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKPMLIGTGVLIVGECLISLTFLPEIFYV
N315 SLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKPMLIGTGVLIVGECLISLTFLPEILYV
NCTC8325 SLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKPMLIGTGVLIVGECLISLTFLPEIFYV
Newman SLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKPMLIGTGVLIVGECLISLTFLPEIFYV
USA300_FPR3757 SLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKPMLIGTGVLIVGECLISLTFLPEIFYV
*********************************************************:**
COL ICCIIGYLFFGLGLGIYATPSTDTAIANAPLEKVGVAAGIYKMASALGGAFGVALSGAVY
N315 ICCIIGYLFFGLGLGIYATPSTDTAIANAPLEKVGVAAGIYKMASALGGAFGVALSGAVY
NCTC8325 ICCIIGYLFFGLGLGIYATPSTDTAIANAPLEKVGVAAGIYKMASALGGAFGVALSGAVY
Newman ICCIIGYLFFGLGLGIYATPSTDTAIANAPLEKVGVAAGIYKMASALGGAFGVALSGAVY
USA300_FPR3757 ICCIIGYLFFGLGLGIYATPSTDTAIANAPLEKVGVAAGIYKMASALGGAFGVALSGAVY
************************************************************
COL AIVSNMTNIYTGAMIALWLNAAMGILSFVIILLLVPKQNDTQL
N315 AIVSNMTNIYTGAMIALWLNAGMGILSFVIILLLVPKQNDTQL
NCTC8325 AIVSNMTNIYTGAMIALWLNAGMGILSFVIILLLVPKQNDTQL
Newman AIVSNMTNIYTGAMIALWLNAGMGILSFVIILLLVPKQNDTQL
USA300_FPR3757 AIVSNMTNIYTGAMIALWLNAGMGILSFVIILLLVPKQNDTQL
*********************.*********************