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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003714000
- symbol?: lexA
- synonym:
- description?: LexA repressor
- LexA repressor
- transcriptional repressor LexA
- DNA damage-inducible repressor
- DNA damage SOS regulatory repressor protein
- repressor LexA
- SOS-response repressor and protease LexA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4016613..4017236
- synteny block?: BlockID0027800
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1294 (lexA)
08BA02176:
C248_1375 (dinR)
11819-97:
MS7_1298 (lexA)
6850:
RSAU_001221 (lexA)
71193:
ST398NM01_1341
ECT-R 2:
ECTR2_1198 (lexA)
ED133:
SAOV_1352c (dinR)
ED98:
SAAV_1320 (lexA)
HO 5096 0412:
SAEMRSA15_11860 (dinR)
JH1:
SaurJH1_1427
JH9:
SaurJH9_1400
JKD6008:
SAA6008_01305 (lexA)
JKD6159:
SAA6159_01206 (lexA)
LGA251:
SARLGA251_12480 (dinR)
M013:
M013TW_1287
MRSA252:
SAR1349 (dinR)
MSHR1132:
SAMSHR1132_11840
MSSA476:
SAS1279
Mu3:
SAHV_1328 (lexA)
Mu50:
SAV1339 (lexA)
MW2:
MW1226 (lexA)
RF122:
SAB1197c (dinR)
ST398:
SAPIG1341 (lexA)
T0131:
SAT0131_01410
TCH60:
HMPREF0772_11869 (lexA)
TW20:
SATW20_13410 (dinR)
USA300_TCH1516:
—
VC40:
SAVC_05935
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDP
N315 MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDP
NCTC8325 MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDP
Newman MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSFTVHGHLSRLEEKGYIEGDP
USA300_FPR3757 MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDP
******************** ******************* ***************. **
COL TKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSD
N315 TKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSD
NCTC8325 TKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSD
Newman TKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSD
USA300_FPR3757 TKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSD
************************************************************
COL IFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMTEEDEATVKRFYKEKNRYRLQ
N315 IFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMTEEDEATVKRFYKEKNRYRLQ
NCTC8325 IFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMTEEDEATVKRFYKEKNRYRLQ
Newman IFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMTEEDEATVKRFYKEKNRYRLQ
USA300_FPR3757 IFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMTEEDEATVKRFYKEKNRYRLQ
************************************************************
COL PENSTMEPIYLDNVAVIGKVIGLYREM
N315 PENSTMEPIYLDNVAVIGKVIGLYREM
NCTC8325 PENSTMEPIYLDNVAVIGKVIGLYREM
Newman PENSTMEPIYLDNVAVIGKVIGLYREM
USA300_FPR3757 PENSTMEPIYLDNVAVIGKVIGLYREM
***************************