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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003364000
- symbol?: isdF
- synonym:
- description?: hemin ABC transporter permease
- hemin ABC transporter permease
- iron/heme permease
- iron compound ABC transporter permease
- heme-iron ABC transporter, permease protein IsdF
- iron ABC transporter permease
- Heme transporter IsdDEF, permease component IsdF
- fecCD transport family protein
- heme ABC transporter, iron transport permease protein IsdF
- heme-iron transport system permease protein isdF
- iron (Fe3+) ABC transporter membrane protein
- iron/heme complex transport system permease protein
- iron transport permease protein
- iron transport permease SirG
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3729923..3730703
- synteny block?: BlockID0024470
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1090 (isdF)
08BA02176:
C248_1160 (isdF)
11819-97:
MS7_1090
6850:
RSAU_001018 (isdF)
71193:
ST398NM01_1130
ECT-R 2:
ECTR2_988
ED133:
SAOV_1130 (isdF)
ED98:
SAAV_1100 (isdF)
HO 5096 0412:
SAEMRSA15_09630 (isdF)
JH1:
SaurJH1_1215
JH9:
SaurJH9_1193
JKD6008:
SAA6008_01088 (isdF)
JKD6159:
SAA6159_00988 (isdF)
LGA251:
SARLGA251_10460 (isdF)
M013:
M013TW_1067
MRSA252:
SAR1107 (isdF)
MSHR1132:
SAMSHR1132_09800
MSSA476:
SAS1068
Mu3:
SAHV_1125
Mu50:
SAV1134
MW2:
MW1016 (isdF)
RF122:
SAB0998 (isdF)
ST398:
SAPIG1130
T0131:
SAT0131_01173 (budA1)
TCH60:
HMPREF0772_12099 (isdF)
TW20:
SATW20_11280 (isdF)
USA300_TCH1516:
USA300HOU_1068 (isdF)
VC40:
SAVC_04830
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -MIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTGSNEAVDSIIDLRLPR
N315 -------------------------------------------------MDSIIDLRLPR
NCTC8325 -MIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTGSNEAVDSIIDLRLPR
Newman MMIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTGSNEAVDSIIDLRLPR
USA300_FPR3757 -MIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTGSNEAVDSIIDLRLPR
:**********
COL ILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRALCMLFIPQLYFYLPLLS
N315 ILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRALCMLFIPQLYFYLPLLS
NCTC8325 ILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRALCMLFIPQLYFYLPLLS
Newman ILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRALCMLFIPQLYFYLPLLS
USA300_FPR3757 ILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRALCMLFIPQLYFYLPLLS
************************************************************
COL FIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLEILTQNPLMKIPQGLTMKIW
N315 FIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLEILTQNPLMKIPQGLTMKIW
NCTC8325 FIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLEILTQNPLMKIPQGLTMKIW
Newman FIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLEILTQNPLMKIPQGLTMKIW
USA300_FPR3757 FIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLEILTQNPLMKIPQGLTMKIW
************************************************************
COL SDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGFNIDRYRWLTGLLAVFLASATV
N315 SDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGFNIDRYRWLTGLLAVFLASATV
NCTC8325 SDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGFNIDRYRWLTGLLAVFLASATV
Newman SDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGFNIDRYRWLTGLLAVFLASATV
USA300_FPR3757 SDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGFNIDRYRWLTGLLAVFLASATV
************************************************************
COL AIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGAWLLLVADLLGRVIQPPLEIPANA
N315 AIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGAWLLLVADLLGRVIQPPLEIPANA
NCTC8325 AIVGQLAFLGIIV-HM---------------------WL---------------------
Newman AIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGAWLLLVADLLGRVIQPPLEIPANA
USA300_FPR3757 AIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGAWLLLVADLLGRVIQPPLEIPANA
************* *: **
COL ILMIVGGPMLIYLICQSQRNRI
N315 ILMIVGGPMLIYLICQSQRNRI
NCTC8325 --------------------ES
Newman ILMIVGGPMLIYLICQSQRNRI
USA300_FPR3757 ILMIVGGPMLIYLICQSQRNRI
.