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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003360000
- symbol?: isdC
- synonym:
- description?: iron-regulated surface determinant protein C
- iron-regulated surface determinant protein C
- heme-iron transport protein IsdC
- heme uptake protein IsdC
- iron-regulated cell surface protein
- iron transport associated domain-containing protein
- NPQTN cell wall surface anchor protein
- iron (Fe2+)-regulated surface determinant protein IsdC
- iron-regulated surface determinant protein C (Staphylococcaliron-regulated protein D)
- Iron-regulated surface determinant protein C precursor
- NEAr transporter
- NPQTN cell wall anchored protein IsdC
- putative surface anchored protein
- putative surface protein
- sortase B signal domain, NPQTN class domain protein
- surface anchored protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3727275..3727959
- synteny block?: BlockID0024430
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1087 (isdC)
08BA02176:
C248_1157 (isdC)
11819-97:
MS7_1087 (isdC)
6850:
RSAU_001015 (isdC)
71193:
ST398NM01_1127
ECT-R 2:
ECTR2_985
ED133:
SAOV_1127 (isdC)
ED98:
SAAV_1097 (isdC)
HO 5096 0412:
SAEMRSA15_09600 (isdC)
JH1:
SaurJH1_1212
JH9:
SaurJH9_1190
JKD6008:
SAA6008_01085 (isdC)
JKD6159:
SAA6159_00985 (isdC)
LGA251:
SARLGA251_10430 (isdC)
M013:
M013TW_1062
MRSA252:
SAR1104 (isdC)
MSHR1132:
SAMSHR1132_09770
MSSA476:
SAS1065
Mu3:
SAHV_1122
Mu50:
SAV1131
MW2:
MW1013 (isdC)
RF122:
SAB0995 (isdC)
ST398:
SAPIG1127
T0131:
SAT0131_01170
TCH60:
HMPREF0772_12102 (isdC)
TW20:
SATW20_11250 (isdC)
USA300_TCH1516:
USA300HOU_1065 (isdC)
VC40:
SAVC_04815
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYI
N315 MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYI
NCTC8325 MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYI
Newman MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYI
USA300_FPR3757 MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYI
************************************************************
COL KKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVY
N315 KKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVY
NCTC8325 KKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVY
Newman KKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVY
USA300_FPR3757 KKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVY
************************************************************
COL IDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESN
N315 IDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESN
NCTC8325 IDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESN
Newman IDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESN
USA300_FPR3757 IDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESN
************************************************************
COL SSNKDKVENPQTNAGTPAYIYTIPVASLALLIAITLFVRKKSKGNVE
N315 SSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFVRKKSKGNVE
NCTC8325 SSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFVRKKSKGNVE
Newman SSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFVRKKSKGNVE
USA300_FPR3757 SSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFVRKKSKGNVE
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