PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003107000
• symbol^?: cdr
• synonym:
• description^?: CoA-disulfide reductase

  descriptions from strain specific annotations:

  • CoA-disulfide reductase
  • coenzyme A disulfide reductase
  • coenzyme A disulfide reductase, putative
• strand^?: -
• coordinates^?: 3492785..3494101
• synteny block^?: BlockID0022000
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0975
N315:
SA0831 (cdr)
NCTC8325:
SAOUHSC_00908
Newman:
NWMN_0841 (cdr)
USA300_FPR3757:
SAUSA300_0873 (cdr)
04-02981:
SA2981_0925 (cdr)
08BA02176:
C248_0996
11819-97:
MS7_0926 (cdr)
6850:
RSAU_000847
71193:
ST398NM01_0970
ECT-R 2:
ECTR2_826 (cdr)
ED133:
SAOV_0917c
ED98:
SAAV_0931
HO 5096 0412:
SAEMRSA15_08000
JH1:
SaurJH1_0989
JH9:
SaurJH9_0970
JKD6008:
SAA6008_00923
JKD6159:
SAA6159_00830
LGA251:
SARLGA251_08880
M013:
M013TW_0889
MRSA252:
SAR0933
MSHR1132:
SAMSHR1132_08220
MSSA476:
SAS0840
Mu3:
SAHV_0965 (cdr)
Mu50:
SAV0970 (cdr)
MW2:
MW0852 (cdr)
RF122:
SAB0839c
ST398:
SAPIG0970 (cdr)
T0131:
SAT0131_01003
TCH60:
HMPREF0772_12275 (cdr)
TW20:
SATW20_09700
USA300_TCH1516:
USA300HOU_0929 (cdr)
VC40:
SAVC_04025

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
  N315            MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYAL
  NCTC8325        MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
  Newman          MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
  USA300_FPR3757  MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
                  ********************************************************:***
  
  COL             AYTPEEFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
  N315            AYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSL
  NCTC8325        AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
  Newman          AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
  USA300_FPR3757  AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
                  *****:*************************:****************************
  
  COL             GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
  N315            GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVIGAGYVSLEVLENLYERGLHPTLIHRS
  NCTC8325        GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
  Newman          GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
  USA300_FPR3757  GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
                  *********************************:**************************
  
  COL             DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
  N315            DKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGTH
  NCTC8325        DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
  Newman          DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
  USA300_FPR3757  DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
                  ********************************:***************************
  
  COL             PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
  N315            PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
  NCTC8325        PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
  Newman          PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
  USA300_FPR3757  PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
                  ************************************************************
  
  COL             AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
  N315            AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
  NCTC8325        AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
  Newman          AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
  USA300_FPR3757  AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
                  ************************************************************
  
  COL             YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
  N315            YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
  NCTC8325        YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
  Newman          YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
  USA300_FPR3757  YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
                  ************************************************************
  
  COL             PPYSHPKDLINMIGYKAK
  N315            PPYSHPKDLINMIGYKAK
  NCTC8325        PPYSHPKDLINMIGYKAK
  Newman          PPYSHPKDLINMIGYKAK
  USA300_FPR3757  PPYSHPKDLINMIGYKAK
                  ******************