Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002566000
- symbol?: —
- synonym:
- description?: hypothetical protein
- strand?: -
- coordinates?: 3076888..3077572
- synteny block?: BlockID0018020
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0659
08BA02176:
C248_0767
11819-97:
MS7_0734
6850:
RSAU_000658
71193:
ST398NM01_0760
ECT-R 2:
ECTR2_634
ED133:
SAOV_0717c
ED98:
SAAV_0645
HO 5096 0412:
SAEMRSA15_06080
JH1:
SaurJH1_0722
JH9:
SaurJH9_0706
JKD6008:
SAA6008_00699
JKD6159:
SAA6159_00637
LGA251:
SARLGA251_06150
M013:
M013TW_0669
MRSA252:
SAR0735
MSHR1132:
SAMSHR1132_06280
MSSA476:
SAS0647
Mu3:
SAHV_0679
Mu50:
SAV0682
MW2:
MW0644
RF122:
SAB0631c
ST398:
SAPIG0760
T0131:
SAT0131_00753 (fadB)
TCH60:
HMPREF0772_12505
TW20:
SATW20_07570
USA300_TCH1516:
USA300HOU_0705
VC40:
SAVC_03040
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKVASKTSAAISNTASDVK
N315 MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKVASKTSAAISNTASDVK
NCTC8325 MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKVASKTSAAISNTASDVK
Newman MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKVASKTSAAISNTASDVK
USA300_FPR3757 MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKVASKTSAAISNTASDVK
************************************************************
COL EYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKDADKMNKILQKNIEKRHKE
N315 EYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKDADKMNKILQKNIEKRHKE
NCTC8325 EYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKDADKMNKILQKNIEKRHKE
Newman EYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKDADKMNKILQKNIEKRHKE
USA300_FPR3757 EYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKDADKMNKILQKNIEKRHKE
************************************************************
COL EQKAREKNEIQRIKDMKKSQKYEEKAGLTPNKLDEKTEKKGDKLAEKNRKEIAKMNKKLQ
N315 EQKAREKNEIQRIKDMKKSQKYEEKAGLTPNKLDEKTEKKGDKLAEKNRKEIAKMNKKLQ
NCTC8325 EQKAREKNEIQRIKDMKKSQKYEEKAGLTPNKLDEKTEKKGDKLAEKNRKEIAKMNKKLQ
Newman EQKAREKNEIQRIKDMKKSQKYEEKAGLTPNKLDEKTEKKGDKLAEKNRKEIAKMNKKLQ
USA300_FPR3757 EQKAREKNEIQRIKDMKKSQKYEEKAGLTPNKLDEKTEKKGDKLAEKNRKEIAKMNKKLQ
************************************************************
COL KNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQQNKENNTEA
N315 KNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQQNKENNTEA
NCTC8325 KNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQQNKENNTEA
Newman KNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQQNKENNTEA
USA300_FPR3757 KNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQQNKENNTEA
***********************************************