PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002130000
• symbol^?: —
• synonym:
• description^?: FKLRK protein

  descriptions from strain specific annotations:

  • FKLRK protein
  • surface protein, putative
• strand^?: +
• coordinates^?: 2623797..2626382
• synteny block^?: BlockID0014360
• occurrence^?: in 74% of 34 strains

⊟Orthologs

COL:
SACOL0479
N315:
SA0394
NCTC8325:
SAOUHSC_00400
Newman:
NWMN_0401
USA300_FPR3757:
SAUSA300_0408
JSNZ:
JSNZ_000369
04-02981:
SA2981_0410
08BA02176:
—
11819-97:
—
6850:
RSAU_000365
71193:
—
ECT-R 2:
ECTR2_369
ED133:
SAOV_0454
ED98:
SAAV_0377
HO 5096 0412:
—
JH1:
SaurJH1_0469
JH9:
SaurJH9_0457
JKD6008:
SAA6008_00437
JKD6159:
—
LGA251:
SARLGA251_03720
M013:
M013TW_0395
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS0397
Mu3:
SAHV_0432
Mu50:
SAV0434
MW2:
MW0395
RF122:
SAB0387
ST398:
—
T0131:
SAT0131_00473
TCH60:
—
TW20:
SATW20_05110
USA300_TCH1516:
USA300HOU_0436
VC40:
SAVC_01800

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  COL             MSENFKLRKMKVGLVSVAITMLYIMTNGQAEASENQNALISNINVDNQEKQNNVNQAVQP
  N315            MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASE------TNQKVSTNQESKAVSQTEQN
  NCTC8325        MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASENQNALISNINVDNQEKQNNVNQAVQP
  Newman          MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASENQNALISNINVDNQEKQNNVNQAVQP
  USA300_FPR3757  MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASENQNALISNINVDNQEKQNNVNQAVQP
  JSNZ            MRENFKLRKVKVGLVSVAITMLYIMSNGQAEASETK---VTN----TNQGINTVSETVHN
                  * *******:***************:********      :*    .::  : *.:: : 
  
  COL             QNNTNETSKVPANFVKLNDIKPGDTSIQGTTLPNQFILLTIDKKDVSSVEDSDSSFVMSD
  N315            SKET-KAAESSKNFVNLDPIKPGAQKVTGTTLPNHIILLNIDGKSADSVEGGYGDFITAN
  NCTC8325        QNNTNETSKVPANFVKLNDIKPGDTSIQGTTLPNQFILLTIDKKDVSSVEDSDSSFVMSD
  Newman          QNNTNETSKVPANFVKLNDIKPGDTSIQGTTLPNQFILLTIDKKDVSSVEDSDSSFVMSD
  USA300_FPR3757  QNNTNETSKVPANFVKLNDIKPGDTSIQGTTLPNQFILLTIDKKDVSSVEDSDSSFVMSD
  JSNZ            SKES-KNEEANKNFVKLDTINPGDQKVTGTTLPHHLILLNVDKRSVDSVEDSGLGIVTAG
                  .::: :  :   ***:*: *:**  .: *****:::***.:* :...***..  .:: :.
  
  COL             KDGNFKYDLNGRKIVHNQEIEVSSSDPYLGDDEEDEEVEETSTEEVGA----EEESTEAK
  N315            DKGEFEYPLNNRKIVHNQEIEVSSSSPDLGDDEEDEEVEESSTEKAGA----EEESTDAK
  NCTC8325        KDGNFKYDLNGRKIVHNQEIEVSSSDPYLGDDEEDEEVEETSTEEVGA----EEESTEAK
  Newman          KDGNFKYDLNGRKIVHNQEIEVSSSDPYLGDDEEDEEVEETSTEEVGA----EEESTEAK
  USA300_FPR3757  KDGNFKYDLNGRKIVHNQEIEVSSSDPYLGDDEEDEEVEETSTEEVGA----EEESTEAK
  JSNZ            EDGRFEYNLKDHKIVHNQEIEVTSSSPDLGEDDEEVEEKASNQKEETANKKDEDESNDVK
                  ..*.*:* *:.:**********:**.* **:*:*: * : :. ::  *    *:**.:.*
  
  COL             ATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKGHTSVKGKVALSINNKFIN
  N315            ATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKGHTSVKGKVALSINNKFIN
  NCTC8325        ATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKGHTSVKGKVALSINNKFIN
  Newman          ATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKGHTSVKGKVALSINNKFIN
  USA300_FPR3757  ATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKGHTSVKGKVALSINNKFIN
  JSNZ            TTVTTPRYEKAYKVPNQQLKQENGHHQVLVEPITAGSGIIKGHTSVKGKVALSINNKFIN
                  :* *********::*::***:::*****::**** *************************
  
  COL             F--ETNANGGPNKEEAKSGSEGIWMPIDDKGYFNFDFKTKRFDDLELKKNDEISLTFAPD
  N315            F--EERAKGGISKEDTKASSDGVWMPINEKGYFDFDFKKNPFDNLELKKNDEISLTFAPD
  NCTC8325        F--ETNANGGPNKEEAKSGSEGIWMPIDDKGYFNFDFKTKRFDDLELKKNDEISLTFAPD
  Newman          F--ETNANGGPNKEEAKSGSEGIWMPIDDKGYFNFDFKTKRFDDLELKKNDEISLTFAPD
  USA300_FPR3757  F--ETNANGGPNKEEAKSGSEGIWMPIDDKGYFNFDFKTKRFDDLELKKNDEISLTFAPD
  JSNZ            LGDSTDVENRLTEDQGKTRYQGIWKHIDDKGYFEFDFKRKPYDNLKLNPDDNVSLTFLPN
                  :  .  .:.  .::: *:  :*:*  *::****:**** : :*:*:*: :*::**** *:
  
  COL             DEDEALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLKDVKEDLHVDEIYGSLYHTEK
  N315            DEDEALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLKDVKEDIHVDEIYGSLYHTEK
  NCTC8325        DEDEALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLKDVKEDLHVDEIYGSLYHTEK
  Newman          DEDEALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLKDVKEDLHVDEIYGSLYHTEK
  USA300_FPR3757  DEDEALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLKDVKEDLHVDEIYGSLYHTEK
  JSNZ            DEEEALKPIIFKTKVTSFDNIESAITSYNPKNINKVTTLTNVKEDLVVEDIYGFEYKSEQ
                  **:****.:********:::*:.* *.*: .:::**..*.:****: *::***  *::*:
  
  COL             GKGIL--DKEGTKVIKGKTKFANAVVKVDSELGEGQEFPDLQVDEKGEFSFDVDHAGFRL
  N315            GKGIL--DKQGTKEITGKTKFANAVVKVYSDLGDAQLFPDIQVDENGKFSFDAEKAGFRL
  NCTC8325        GKGIL--DKEGTKVIKGKTKFANAVVKVDSELGEGQEFPDLQVDEKGEFSFDVDHAGFRL
  Newman          GKGIL--DKEGTKVIKGKTKFANAVVKVDSELGEGQEFPDLQVDEKGEFSFDVDHAGFRL
  USA300_FPR3757  GKGIL--DKEGTKVIKGKTKFANAVVKVDSELGEGQEFPDLQVDEKGEFSFDVDHAGFRL
  JSNZ            GRGIPQNNSHSTKEIKGKTKFANAVVKVDSELGEGQEFPDLQVNEKGEFTFNSYDAGYRL
                  *:**   :...** *.************ *:**:.* ***:**:*:*:*:*:  .**:**
  
  COL             QNGETLNFTVVDPITGELLSGNFVSKNIDIYESPEEKADREFDERMENTPAYHKLHGDKI
  N315            QNGETLNFAVVKPITGDLLHQGFVSKYIDVYESPEEKKEREFEEKLENTPAYHKLHGDKI
  NCTC8325        QNGETLNFTVVDPITGELLSGNFVSKNIDIYESPEEKADREFDERMENTPAYHKLHGDKI
  Newman          QNGETLNFTVVDPITGELLSGNFVSKNIDIYESPEEKADREFDERMENTPAYHKLHGDKI
  USA300_FPR3757  QNGETLNFTVVDPITGELLSGNFVSKNIDIYESPEEKADREFDERMENTPAYHKLHGDKI
  JSNZ            YNGETLNFVIVDPITGVQLSQGFVSKYIDVYESPEQKKEREFDEKLESTPAYYQLHGDKI
                   *******.:*.****  *  .**** **:*****:* :***:*::*.****::******
  
  COL             VGYDTNGFPITWFYPLGEKKVERKAPKLEK
  N315            VGYDVQGNPSTWFYPLGEKKVERTTPKLEK
  NCTC8325        VGYDTNGFPITWFYPLGEKKVERKAPKLEK
  Newman          VGYDTNGFPITWFYPLGEKKVERKAPKLEK
  USA300_FPR3757  VGYDTNGFPITWFYPLGEKKVERKAPKLEK
  JSNZ            IGFDTEGGVSTWFDALDKKELEKVLRQY--
                  :*:*.:*   *** .*.:*::*:   :